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Healthcare Medicine

Top 10 Best Surgery Emr Software of 2026

Discover top surgery EMR software solutions. Streamline clinic operations—compare features and choose the best fit today.

Jannik Lindner

Jannik Lindner

Feb 11, 2026

10 tools comparedExpert reviewed
Independent evaluation · Unbiased commentary · Updated regularly
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In complex surgical settings, specialized EMR software is critical for streamlining workflows, maintaining compliance, and delivering seamless patient care—with the right tool directly impacting operational efficiency and clinical outcomes. The 10 solutions listed here, from ambulatory-specific platforms to enterprise-grade systems, represent the most innovative and effective options tailored to the unique needs of surgeons and perioperative teams.

Quick Overview

  1. 1#1: Surgical Information Systems (SIS) - SIS delivers a fully integrated EMR, revenue cycle management, and analytics platform specifically designed for ambulatory surgery centers.
  2. 2#2: Provation MD - Provation MD provides structured, time-saving clinical documentation software for surgeons and proceduralists in perioperative settings.
  3. 3#3: Amkai - Amkai offers cloud-based EMR, practice management, and analytics solutions tailored for ambulatory surgery centers.
  4. 4#4: Epic Systems - Epic provides a comprehensive EHR platform with advanced perioperative modules for surgical scheduling, documentation, and inventory management.
  5. 5#5: Oracle Cerner - Cerner delivers enterprise EHR solutions featuring robust surgical workflow automation and operating room management.
  6. 6#6: Picis - Picis specializes in perioperative EMR software for streamlining OR workflows, case management, and anesthesia documentation.
  7. 7#7: Allscripts - Allscripts offers EHR and practice management tools with integrated surgical templates and interoperability for ambulatory surgery.
  8. 8#8: athenahealth - athenaOne is a cloud-based EHR platform supporting surgical practices with revenue cycle management and specialty-specific workflows.
  9. 9#9: NextGen Healthcare - NextGen provides EHR solutions with customizable templates and surgical specialty features for efficient patient care.
  10. 10#10: eClinicalWorks - eClinicalWorks offers scalable EHR software with telehealth and patient engagement tools adaptable for surgical practices.

We ranked these tools based on key factors including workflow integration, documentation usability, clinical and financial management features, user experience, and overall value, ensuring they meet the rigorous demands of modern surgical practices.

Comparison Table

This comparison table explores critical features, usability, and integration strengths of top Surgery EMR tools including Surgical Information Systems (SIS), Provation MD, Amkai, Epic Systems, Oracle Cerner, and additional platforms. By analyzing these solutions, readers will discover how to align their practice needs—like workflow efficiency or specialized surgical documentation—with the right software.

SIS delivers a fully integrated EMR, revenue cycle management, and analytics platform specifically designed for ambulatory surgery centers.

Features
9.8/10
Ease
8.7/10
Value
9.2/10

Provation MD provides structured, time-saving clinical documentation software for surgeons and proceduralists in perioperative settings.

Features
9.5/10
Ease
8.4/10
Value
8.7/10
3Amkai logo8.7/10

Amkai offers cloud-based EMR, practice management, and analytics solutions tailored for ambulatory surgery centers.

Features
9.2/10
Ease
8.1/10
Value
8.4/10

Epic provides a comprehensive EHR platform with advanced perioperative modules for surgical scheduling, documentation, and inventory management.

Features
9.4/10
Ease
7.2/10
Value
7.8/10

Cerner delivers enterprise EHR solutions featuring robust surgical workflow automation and operating room management.

Features
9.2/10
Ease
7.4/10
Value
8.1/10
6Picis logo8.2/10

Picis specializes in perioperative EMR software for streamlining OR workflows, case management, and anesthesia documentation.

Features
9.1/10
Ease
7.4/10
Value
7.8/10
7Allscripts logo7.8/10

Allscripts offers EHR and practice management tools with integrated surgical templates and interoperability for ambulatory surgery.

Features
8.4/10
Ease
6.9/10
Value
7.2/10

athenaOne is a cloud-based EHR platform supporting surgical practices with revenue cycle management and specialty-specific workflows.

Features
8.4/10
Ease
8.0/10
Value
7.8/10

NextGen provides EHR solutions with customizable templates and surgical specialty features for efficient patient care.

Features
8.8/10
Ease
7.6/10
Value
8.0/10

eClinicalWorks offers scalable EHR software with telehealth and patient engagement tools adaptable for surgical practices.

Features
7.8/10
Ease
6.2/10
Value
6.8/10
1
Surgical Information Systems (SIS) logo

Surgical Information Systems (SIS)

specialized

SIS delivers a fully integrated EMR, revenue cycle management, and analytics platform specifically designed for ambulatory surgery centers.

Overall Rating9.5/10
Features
9.8/10
Ease of Use
8.7/10
Value
9.2/10
Standout Feature

Integrated Periop Scheduler with predictive analytics for block time optimization and case sequencing

Surgical Information Systems (SIS), available at sisfirst.com, is a leading perioperative software platform designed exclusively for ambulatory surgery centers (ASCs) and hospital outpatient departments. It provides a comprehensive EMR solution tailored to surgical workflows, including scheduling, clinical documentation, inventory management, and revenue cycle processes. SIS optimizes perioperative efficiency with real-time analytics, interoperability, and tools for compliance and quality reporting.

Pros

  • Specialized perioperative modules covering full surgical lifecycle from pre-op to billing
  • Seamless integration with EHRs, practice management systems, and HL7 standards
  • Advanced analytics and dashboards for operational insights and benchmarking

Cons

  • High implementation costs and lengthy onboarding process
  • Steep learning curve for non-specialized staff
  • Pricing is custom and may be prohibitive for small practices

Best For

Ambulatory surgery centers and hospital ORs needing a robust, surgery-specific EMR with end-to-end perioperative management.

Pricing

Custom quote-based pricing, typically subscription model starting at $10,000+ per OR annually depending on modules and facility size.

2
Provation MD logo

Provation MD

specialized

Provation MD provides structured, time-saving clinical documentation software for surgeons and proceduralists in perioperative settings.

Overall Rating9.1/10
Features
9.5/10
Ease of Use
8.4/10
Value
8.7/10
Standout Feature

Intelligent Template Technology with AI auto-population and voice-to-structured-data conversion for rapid, error-free reports

Provation MD is a specialized documentation and coding platform designed for surgical and procedural specialties, including gastroenterology, pulmonology, and general surgery. It enables clinicians to create structured operative notes, endoscopy reports, and procedure documentation using customizable templates, voice recognition, and AI-driven automation. The software integrates with major EHR systems like Epic and Cerner to streamline workflows, ensure compliance, and optimize reimbursement through accurate coding.

Pros

  • Vast library of specialty-specific templates accelerates documentation
  • Seamless integration with EHRs reduces data entry errors
  • Advanced voice dictation and auto-coding improve efficiency and revenue capture

Cons

  • Steep initial learning curve for customization
  • Enterprise-level pricing can be prohibitive for smaller practices
  • Primarily focused on procedural reporting, not full-spectrum EMR functionality

Best For

High-volume surgical and procedural teams in hospitals or ambulatory surgery centers prioritizing fast, compliant documentation.

Pricing

Custom enterprise subscription pricing, typically $300-$500 per provider/month or per-procedure models; quotes available upon request.

Visit Provation MDprovationmedical.com
3
Amkai logo

Amkai

specialized

Amkai offers cloud-based EMR, practice management, and analytics solutions tailored for ambulatory surgery centers.

Overall Rating8.7/10
Features
9.2/10
Ease of Use
8.1/10
Value
8.4/10
Standout Feature

Advanced OR Scheduler with AI-driven block optimization for maximum room utilization and surgeon efficiency

Amkai is a cloud-based EMR and practice management software specifically designed for ambulatory surgery centers (ASCs). It streamlines surgical workflows with tools for OR scheduling, perioperative documentation, anesthesia records, and integrated billing. The platform ensures HIPAA compliance, supports revenue cycle management, and provides analytics for operational efficiency in surgical environments.

Pros

  • Tailored surgical workflows including advanced OR scheduling and block time management
  • Seamless integration of clinical documentation, billing, and compliance reporting
  • Robust mobile access and real-time data for perioperative teams

Cons

  • Custom quote-based pricing lacks transparency and can be costly for smaller ASCs
  • Initial setup and training require significant time investment
  • Limited flexibility for non-surgical specialties

Best For

Ambulatory surgery centers and multi-specialty surgical practices needing a comprehensive, surgery-optimized EMR.

Pricing

Custom pricing per facility, typically $400-$800 per user/month depending on modules, surgeons, and scale; demo required for quotes.

Visit Amkaiamkai.com
4
Epic Systems logo

Epic Systems

enterprise

Epic provides a comprehensive EHR platform with advanced perioperative modules for surgical scheduling, documentation, and inventory management.

Overall Rating8.7/10
Features
9.4/10
Ease of Use
7.2/10
Value
7.8/10
Standout Feature

OpTime perioperative suite for end-to-end surgical case management, including block time scheduling, intra-op charting, and automated handoffs

Epic Systems offers a comprehensive enterprise-level EMR platform with robust support for surgical workflows through its OpTime module, handling everything from preoperative assessments and scheduling to intraoperative documentation and postoperative follow-up. It integrates seamlessly with broader hospital systems for real-time data sharing, inventory management, and compliance reporting specific to surgery. Designed for high-volume environments, it emphasizes interoperability and customization to fit complex surgical departments.

Pros

  • Highly customizable perioperative workflows with OpTime module
  • Excellent interoperability and integration with hospital-wide systems
  • Proven scalability for large surgical centers and hospitals

Cons

  • Steep learning curve and complex user interface
  • Extremely high implementation and maintenance costs
  • Lengthy deployment timeline often exceeding a year

Best For

Large hospitals and academic medical centers with high surgical volumes and the resources for extensive customization.

Pricing

Custom enterprise pricing; implementation often costs millions upfront, with annual subscriptions scaling by bed size and modules (typically $500K+ per year for mid-sized facilities).

5
Oracle Cerner logo

Oracle Cerner

enterprise

Cerner delivers enterprise EHR solutions featuring robust surgical workflow automation and operating room management.

Overall Rating8.7/10
Features
9.2/10
Ease of Use
7.4/10
Value
8.1/10
Standout Feature

SurgiNet perioperative platform with real-time OR scheduling, inventory automation, and predictive analytics for case optimization

Oracle Cerner is a leading enterprise-grade electronic medical record (EMR) system tailored for healthcare organizations, offering specialized modules for surgical workflows including preoperative assessment, intraoperative documentation, and postoperative management. It provides tools for OR scheduling, anesthesia tracking, inventory management, and integration with imaging and lab systems to streamline surgical care. As part of Oracle Health, it leverages cloud-based scalability and AI-driven insights for enhanced decision-making in high-volume surgical environments.

Pros

  • Comprehensive perioperative suite covering pre-op to post-op workflows
  • Seamless integration with hospital-wide systems and Oracle analytics
  • Robust compliance tools for surgical regulations like HIPAA and Meaningful Use

Cons

  • Steep learning curve and complex interface for new users
  • High implementation costs and lengthy setup timelines
  • Customization often requires vendor support

Best For

Large hospitals and health systems handling high-volume complex surgeries that need enterprise scalability and deep integrations.

Pricing

Custom enterprise pricing; typically $500K+ annually for mid-sized implementations, scaling with users and modules.

6
Picis logo

Picis

specialized

Picis specializes in perioperative EMR software for streamlining OR workflows, case management, and anesthesia documentation.

Overall Rating8.2/10
Features
9.1/10
Ease of Use
7.4/10
Value
7.8/10
Standout Feature

Clinician-centric anesthesia touch documentation system with customizable flowsheets for rapid, accurate intraoperative recording

Picis offers a specialized perioperative EMR solution tailored for surgical environments, including operating rooms, anesthesia services, and post-anesthesia care units. It provides comprehensive tools for surgical scheduling, anesthesia documentation, perioperative charting, inventory management, and compliance reporting. The software emphasizes clinician workflows with real-time data capture and integration capabilities to enhance efficiency in high-acuity surgical settings.

Pros

  • Robust anesthesia and perioperative documentation tailored for surgical teams
  • Real-time analytics and dashboards for OR efficiency and decision-making
  • Strong HL7 integration with hospital systems like EHRs and billing

Cons

  • Steep learning curve and lengthy implementation for non-enterprise users
  • High customization costs and dependency on vendor support
  • Less intuitive mobile access compared to modern cloud-native EMRs

Best For

Large hospitals and ambulatory surgery centers handling complex, high-volume procedures requiring specialized perioperative management.

Pricing

Enterprise custom pricing; typically $100K+ annually based on modules, users, and facility size, with perpetual license options available.

Visit Picispicis.com
7
Allscripts logo

Allscripts

enterprise

Allscripts offers EHR and practice management tools with integrated surgical templates and interoperability for ambulatory surgery.

Overall Rating7.8/10
Features
8.4/10
Ease of Use
6.9/10
Value
7.2/10
Standout Feature

Sunrise Perioperative Suite for end-to-end surgical care coordination

Allscripts, through its Sunrise EMR platform, delivers a comprehensive electronic medical record system designed for surgical environments, handling everything from pre-operative assessments and scheduling to intra-operative documentation and post-operative care. It integrates with hospital information systems for seamless data flow across departments. The software emphasizes regulatory compliance and interoperability, making it suitable for high-volume surgical centers.

Pros

  • Robust perioperative modules for full surgical workflow management
  • Strong interoperability with other healthcare systems via APIs
  • Advanced analytics and reporting for surgical outcomes

Cons

  • Steep learning curve due to complex interface
  • High implementation and customization costs
  • Occasional performance issues in large-scale deployments

Best For

Large hospitals and surgical centers requiring enterprise-grade integration and scalability.

Pricing

Custom enterprise pricing, typically starting at $500+ per user/month with additional setup fees exceeding $100K for full implementation.

Visit Allscriptsallscripts.com
8
athenahealth logo

athenahealth

enterprise

athenaOne is a cloud-based EHR platform supporting surgical practices with revenue cycle management and specialty-specific workflows.

Overall Rating8.2/10
Features
8.4/10
Ease of Use
8.0/10
Value
7.8/10
Standout Feature

Integrated athenaOne Revenue Cycle Management with AI-driven claims optimization specifically tuned for complex surgical coding and reimbursements

athenahealth is a comprehensive cloud-based EMR and practice management platform designed for surgical practices, offering tools for preoperative planning, intraoperative documentation, postoperative care, and revenue cycle management. It integrates EHR functionality with scheduling, billing, and patient engagement features tailored to surgical workflows. The system supports interoperability with other healthcare systems, enabling seamless data exchange for surgical teams.

Pros

  • Robust integration with revenue cycle management for efficient surgical billing
  • Cloud-based accessibility with mobile support for on-the-go surgical documentation
  • Strong interoperability and compliance features for regulatory requirements in surgery

Cons

  • High cost structure that may strain smaller surgical practices
  • Customization options limited compared to surgery-specific EMRs
  • Occasional performance lags during peak usage in high-volume OR environments

Best For

Mid-sized surgical practices seeking an all-in-one cloud EMR with strong billing and interoperability capabilities.

Pricing

Custom pricing based on practice size and needs; typically starts at $400-$700 per provider per month including EHR, PM, and RCM services.

Visit athenahealthathenahealth.com
9
NextGen Healthcare logo

NextGen Healthcare

enterprise

NextGen provides EHR solutions with customizable templates and surgical specialty features for efficient patient care.

Overall Rating8.3/10
Features
8.8/10
Ease of Use
7.6/10
Value
8.0/10
Standout Feature

Specialty-optimized surgical templates and workflow automation that adapt to procedure-specific needs, reducing documentation time by up to 30%.

NextGen Healthcare provides a comprehensive EHR and EMR platform tailored for ambulatory practices, including surgical specialties, with tools for pre-operative assessments, intra-operative documentation, and post-operative follow-up. It integrates practice management, revenue cycle management, and population health analytics to support efficient surgical workflows. The system is ONC-certified and offers customizable templates for various surgical procedures, enabling streamlined charting and compliance with healthcare regulations.

Pros

  • Robust specialty-specific templates for surgical documentation and workflows
  • Strong interoperability with labs, imaging, and billing systems
  • Advanced analytics and population health tools for surgical outcome tracking

Cons

  • Steep learning curve and complex implementation process
  • Higher upfront costs and customization fees
  • Occasional user-reported performance lags during peak usage

Best For

Mid-sized surgical practices or ambulatory surgery centers seeking scalable, enterprise-grade EMR with deep integration capabilities.

Pricing

Custom enterprise pricing, typically $600–$1,200 per provider per month plus implementation fees starting at $50,000+.

10
eClinicalWorks logo

eClinicalWorks

enterprise

eClinicalWorks offers scalable EHR software with telehealth and patient engagement tools adaptable for surgical practices.

Overall Rating7.1/10
Features
7.8/10
Ease of Use
6.2/10
Value
6.8/10
Standout Feature

Customizable specialty templates and macros optimized for efficient surgical note-taking and procedure logging

eClinicalWorks is a comprehensive EHR and practice management platform adaptable for surgical practices, providing customizable templates for operative notes, procedure scheduling, and pre/post-op patient tracking. It integrates billing, e-prescribing, telehealth, and interoperability features to support surgical workflows in ambulatory and hospital settings. While not exclusively surgery-focused, its modular design allows specialization through add-ons for inventory management and compliance reporting.

Pros

  • All-in-one integration of EHR, PM, and revenue cycle for streamlined surgical operations
  • Strong interoperability with HIEs and devices for surgical data exchange
  • Scalable for multi-location surgical groups with mobile access

Cons

  • Clunky, outdated interface slows down surgical documentation
  • Steep learning curve requires extensive training for surgical staff
  • Customer support often criticized for slow response times

Best For

Large surgical practices or multi-specialty groups needing a versatile, enterprise-level EMR with robust administrative tools.

Pricing

Custom quotes; typically $400-$600 per provider/month plus implementation fees and add-ons for surgical modules.

Visit eClinicalWorkseclinicalworks.com

Conclusion

Reviewing the top 10 surgery EMR software tools, Surgical Information Systems (SIS) emerges as the leading choice, providing a fully integrated platform designed exclusively for ambulatory surgery centers. While Provation MD and Amkai follow closely, offering structured documentation and tailored workflows for distinct needs, SIS’s specialized focus and comprehensive features make it the standout pick. Each platform balances unique strengths, ensuring there’s a solution to suit diverse surgical practice requirements.

Surgical Information Systems (SIS) logo
Our Top Pick
Surgical Information Systems (SIS)

Take the next step in optimizing your surgical practice by trying Surgical Information Systems (SIS), the top-ranked tool, and experience its seamless integration and focused functionality.