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Healthcare Medicine

Top 10 Best Functional Medicine Software of 2026

Explore the top 10 functional medicine software to streamline practice management—compare features and find the best fit. Start your search today!

Alexander Schmidt

Alexander Schmidt

Feb 11, 2026

10 tools comparedExpert reviewed
Independent evaluation · Unbiased commentary · Updated regularly
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In the evolving field of functional medicine, robust software is critical to delivering personalized, efficient care—encompassing EHR, lab integration, and operational tools. With options spanning comprehensive platforms like Power2Practice to specialized tools such as Fullscript, choosing the right solution directly impacts patient outcomes and practice sustainability, making this curated list essential for providers navigating the competitive landscape.

Quick Overview

  1. 1#1: Power2Practice - Comprehensive EHR and practice management platform designed specifically for functional medicine practitioners with genomics, lab integration, and personalized care tools.
  2. 2#2: Practice Better - All-in-one platform for functional medicine and wellness providers offering EHR, telehealth, billing, charting, and client portals.
  3. 3#3: Healthie - Modern EMR solution for nutritionists and functional medicine pros with secure messaging, goal tracking, telehealth, and integrations.
  4. 4#4: Fullscript - Digital dispensary platform enabling functional practitioners to create personalized supplement protocols and streamline fulfillment.
  5. 5#5: NutriAdmin - Practice management software tailored for nutritionists and functional medicine with meal planning, telehealth, billing, and client apps.
  6. 6#6: Jane - Cloud-based practice management for integrative health pros featuring scheduling, charting, billing, and telehealth capabilities.
  7. 7#7: SimplePractice - HIPAA-compliant EHR and practice management tool used by functional medicine providers for notes, billing, telehealth, and scheduling.
  8. 8#8: ClinicSense - Integrated software for alternative medicine practices with SOAP notes, automated billing, marketing, and appointment reminders.
  9. 9#9: WellnessLiving - All-in-one business platform for wellness and functional medicine clinics handling bookings, payments, marketing, and memberships.
  10. 10#10: Mindbody - Enterprise software for wellness businesses including functional medicine with class scheduling, client management, and e-commerce.

Tools were ranked based on specialized features for functional care, user experience, HIPAA compliance, and overall value, ensuring a focus on both practical utility and long-term effectiveness for practitioners.

Comparison Table

This comparison table explores key functional medicine software tools—including Power2Practice, Practice Better, Healthie, Fullscript, NutriAdmin, and more—shedding light on their distinct features and capabilities. Readers will learn to evaluate options based on patient management, supplement dispensing, and clinic workflow needs, helping them find the right fit for their practice. Whether prioritizing customization, integration, or user-friendliness, the table distills essential details to streamline the selection process.

Comprehensive EHR and practice management platform designed specifically for functional medicine practitioners with genomics, lab integration, and personalized care tools.

Features
9.8/10
Ease
9.2/10
Value
9.4/10

All-in-one platform for functional medicine and wellness providers offering EHR, telehealth, billing, charting, and client portals.

Features
9.2/10
Ease
8.1/10
Value
8.3/10
3Healthie logo8.5/10

Modern EMR solution for nutritionists and functional medicine pros with secure messaging, goal tracking, telehealth, and integrations.

Features
8.7/10
Ease
9.0/10
Value
8.0/10
4Fullscript logo8.6/10

Digital dispensary platform enabling functional practitioners to create personalized supplement protocols and streamline fulfillment.

Features
9.1/10
Ease
8.8/10
Value
8.2/10
5NutriAdmin logo8.2/10

Practice management software tailored for nutritionists and functional medicine with meal planning, telehealth, billing, and client apps.

Features
8.5/10
Ease
9.0/10
Value
8.7/10
6Jane logo7.6/10

Cloud-based practice management for integrative health pros featuring scheduling, charting, billing, and telehealth capabilities.

Features
7.2/10
Ease
9.1/10
Value
7.9/10

HIPAA-compliant EHR and practice management tool used by functional medicine providers for notes, billing, telehealth, and scheduling.

Features
6.8/10
Ease
9.2/10
Value
7.9/10

Integrated software for alternative medicine practices with SOAP notes, automated billing, marketing, and appointment reminders.

Features
7.0/10
Ease
8.5/10
Value
7.5/10

All-in-one business platform for wellness and functional medicine clinics handling bookings, payments, marketing, and memberships.

Features
6.5/10
Ease
8.4/10
Value
7.2/10
10Mindbody logo6.2/10

Enterprise software for wellness businesses including functional medicine with class scheduling, client management, and e-commerce.

Features
5.7/10
Ease
7.8/10
Value
5.9/10
1
Power2Practice logo

Power2Practice

specialized

Comprehensive EHR and practice management platform designed specifically for functional medicine practitioners with genomics, lab integration, and personalized care tools.

Overall Rating9.7/10
Features
9.8/10
Ease of Use
9.2/10
Value
9.4/10
Standout Feature

The fully integrated online dispensary with real-time inventory, affiliate partnerships, and seamless patient checkout for supplements

Power2Practice is a comprehensive EHR and practice management software designed specifically for functional and integrative medicine practitioners. It streamlines workflows with customizable SOAP notes, automated lab ordering from over 20 functional labs, and a built-in online dispensary for supplements and products. The platform also includes telehealth, patient portals, billing, and compliance tools, enabling holistic, root-cause-focused care.

Pros

  • Tailored templates and tools for functional medicine protocols, including genomic and specialty lab integrations
  • Integrated dispensary boosts revenue with automated inventory, shipping, and patient purchasing
  • Robust telehealth and patient engagement features enhance personalized care delivery

Cons

  • Steep initial learning curve for advanced customization
  • Higher pricing tier compared to general EHRs
  • Limited third-party app marketplace integrations

Best For

Functional medicine practitioners and integrative clinics seeking an all-in-one platform for personalized patient care, lab management, and supplement dispensing.

Pricing

Starts at $399 per provider/month (billed annually), with custom enterprise plans; includes setup fees and add-ons for dispensary or telehealth.

Visit Power2Practicepower2practice.com
2
Practice Better logo

Practice Better

specialized

All-in-one platform for functional medicine and wellness providers offering EHR, telehealth, billing, charting, and client portals.

Overall Rating8.7/10
Features
9.2/10
Ease of Use
8.1/10
Value
8.3/10
Standout Feature

Built-in Fullscript dispensary integration for direct supplement recommendations and automated fulfillment

Practice Better is a comprehensive practice management platform tailored for functional, integrative, and holistic health practitioners. It provides EHR with customizable SOAP notes and protocols, client scheduling, secure telehealth, billing, and a patient portal for intake forms and lab sharing. The software excels in supporting functional medicine workflows through supplement dispensary integration and outcome tracking tools.

Pros

  • All-in-one platform reduces need for multiple tools
  • Strong customization for functional medicine protocols and forms
  • Seamless integration with Fullscript dispensary and select labs

Cons

  • Interface has a learning curve for advanced features
  • Customer support response times can vary
  • Limited built-in analytics compared to specialized FM tools

Best For

Solo or small functional medicine practices seeking an integrated EHR, scheduling, and dispensary solution.

Pricing

Starts at $29/month (Essentials) per provider, up to $99/month (Pro), with annual discounts and add-ons for telehealth.

Visit Practice Betterpracticebetter.io
3
Healthie logo

Healthie

specialized

Modern EMR solution for nutritionists and functional medicine pros with secure messaging, goal tracking, telehealth, and integrations.

Overall Rating8.5/10
Features
8.7/10
Ease of Use
9.0/10
Value
8.0/10
Standout Feature

Visual goal tracking sliders and progress dashboards that enable patients to log symptoms, biometrics, and lifestyle data in real-time for personalized functional medicine interventions

Healthie is an all-in-one telehealth and EHR platform tailored for wellness professionals, including functional medicine practitioners, offering secure video consultations, customizable charting, and client portals. It supports personalized care through goal tracking, symptom logging, meal planning, and integrations with labs like Quest and LabCorp for result uploads. While versatile for holistic practices, it emphasizes practice management alongside patient engagement tools to streamline functional medicine workflows.

Pros

  • Highly customizable SOAP notes and intake forms for root-cause documentation
  • Seamless telehealth integration with EHR and billing
  • Strong client portal for self-tracking symptoms, goals, and supplements

Cons

  • Lacks advanced automated lab parsing or genomics tools common in specialized functional med software
  • Pricing scales quickly for multi-provider practices
  • Limited native support for complex functional lab panels without manual uploads

Best For

Solo or small functional medicine practices seeking an intuitive, HIPAA-compliant platform for telehealth, charting, and client engagement without needing heavy customization.

Pricing

Plans start at $99/month for solo providers (Core), scaling to $299/month (Plus) and $499+/month (Pro) for advanced features like insurance billing and API access.

Visit Healthiegethealthie.com
4
Fullscript logo

Fullscript

specialized

Digital dispensary platform enabling functional practitioners to create personalized supplement protocols and streamline fulfillment.

Overall Rating8.6/10
Features
9.1/10
Ease of Use
8.8/10
Value
8.2/10
Standout Feature

Dynamic Protocol Builder that lets practitioners design shareable, step-by-step supplement regimens auto-populating patient carts for effortless compliance

Fullscript is a specialized platform for functional medicine practitioners, focusing on streamlined supplement dispensing from a vast catalog of professional-grade products. It enables the creation of personalized patient protocols, seamless ordering through a patient portal, and tracking of adherence and outcomes. The software integrates with popular EHR systems like Practice Better and Charm, providing analytics to optimize protocols and inventory management.

Pros

  • Extensive catalog of over 300 professional supplement brands with reliable sourcing
  • Intuitive protocol builder for creating and sharing customized, multi-phase plans
  • Robust integrations with EHRs and telehealth tools for efficient workflow

Cons

  • Primarily supplement-focused, lacking built-in lab analysis or lifestyle tracking for full FM needs
  • Revenue model relies on order volume and margins, which may not suit low-volume practices
  • Patient portal occasionally experiences delays or UI glitches per user feedback

Best For

Functional medicine practitioners emphasizing personalized supplement protocols who need hassle-free dispensing and adherence tracking without managing physical inventory.

Pricing

Free core platform access; practitioners retain 25-40% margins on orders, with optional Enterprise plans starting at $150/month for advanced analytics and support.

Visit Fullscriptfullscript.com
5
NutriAdmin logo

NutriAdmin

specialized

Practice management software tailored for nutritionists and functional medicine with meal planning, telehealth, billing, and client apps.

Overall Rating8.2/10
Features
8.5/10
Ease of Use
9.0/10
Value
8.7/10
Standout Feature

Comprehensive meal planner with 12,000+ analyzed recipes and macro/nutrient customization for functional nutrition protocols

NutriAdmin is a cloud-based practice management platform tailored for nutritionists, dietitians, and functional medicine practitioners focusing on personalized nutrition plans. It streamlines client onboarding, appointment scheduling, telehealth consultations, meal planning with a vast recipe database, progress tracking, and integrated billing. While strong in nutrition-specific tools, it supports functional medicine workflows through customizable forms, client portals, and habit tracking but lacks deep integrations for advanced lab testing or biomarkers.

Pros

  • Intuitive interface with drag-and-drop meal planner and 12,000+ recipe database for quick personalized plans
  • Robust client management including mobile app, telehealth, and automated reminders
  • Affordable pricing with strong value for solo practitioners

Cons

  • Limited integrations with functional medicine labs or EHR systems like advanced biomarker tracking
  • Reporting and analytics are basic, lacking advanced data visualization for outcomes
  • No built-in supplement database or dosing calculator

Best For

Solo or small functional medicine practices emphasizing nutrition therapy, meal planning, and client engagement over complex lab integrations.

Pricing

Starts at $39/month (Solo plan) up to $99/month (Pro plan) with 14-day free trial; annual discounts available.

Visit NutriAdminnutriadmin.com
6
Jane logo

Jane

specialized

Cloud-based practice management for integrative health pros featuring scheduling, charting, billing, and telehealth capabilities.

Overall Rating7.6/10
Features
7.2/10
Ease of Use
9.1/10
Value
7.9/10
Standout Feature

Exceptionally user-friendly online booking and iPad-optimized charting for seamless in-clinic workflows

Jane.app is a cloud-based practice management software tailored for health and wellness professionals, offering appointment scheduling, customizable SOAP charting, integrated telehealth, billing, and patient portals. It supports functional medicine practitioners through flexible intake forms, inventory management for supplements, and basic patient tracking, but lacks advanced tools like lab result integrations or protocol builders. Overall, it streamlines administrative tasks for smaller practices focused on holistic care.

Pros

  • Highly intuitive interface with mobile app support
  • Customizable charting and intake forms adaptable for functional medicine
  • Built-in inventory for supplement sales and patient portal for communication

Cons

  • Limited integrations with functional medicine-specific labs or testing services
  • No advanced features like symptom timelines or personalized protocol templates
  • Billing focused on cash-pay rather than complex insurance for functional med

Best For

Solo or small functional medicine practitioners needing straightforward scheduling, charting, and telehealth without specialized deep-dive tools.

Pricing

Starts at $74 CAD/month per provider (Solo plan), with Essentials at $99 CAD, Premium at $149 CAD, and Enterprise custom; annual discounts available.

Visit Janejane.app
7
SimplePractice logo

SimplePractice

enterprise

HIPAA-compliant EHR and practice management tool used by functional medicine providers for notes, billing, telehealth, and scheduling.

Overall Rating7.4/10
Features
6.8/10
Ease of Use
9.2/10
Value
7.9/10
Standout Feature

Automated superbill generation and client payment portal for easy out-of-network reimbursements

SimplePractice is an all-in-one practice management platform primarily designed for mental health and wellness professionals, offering scheduling, billing, telehealth, documentation, and a client portal. For functional medicine practitioners, it provides solid administrative tools to manage appointments, insurance claims, and secure video sessions but lacks deep specialization in FM-specific workflows like lab result integrations or personalized treatment timelines. It excels in streamlining everyday operations for solo or small practices transitioning to digital tools.

Pros

  • Intuitive interface with quick setup and mobile app access
  • Seamless billing and insurance eligibility checks
  • HIPAA-compliant telehealth and client portal for self-scheduling

Cons

  • Limited integrations for functional medicine labs or supplement dispensaries
  • Basic customization for FM-specific documentation templates
  • Additional per-client or usage fees can increase costs

Best For

Solo or small functional medicine practices needing reliable scheduling, billing, and telehealth without advanced clinical tracking tools.

Pricing

Starts at $29/user/month (Essentials), $69 (Professional), $99+ (Enterprise); plus optional fees for e-signatures ($10/mo) and texting ($0.20/message).

Visit SimplePracticesimplepractice.com
8
ClinicSense logo

ClinicSense

specialized

Integrated software for alternative medicine practices with SOAP notes, automated billing, marketing, and appointment reminders.

Overall Rating7.2/10
Features
7.0/10
Ease of Use
8.5/10
Value
7.5/10
Standout Feature

Robust inventory and e-commerce tools for seamless supplement dispensing and sales directly through the platform

ClinicSense is an all-in-one practice management platform designed primarily for wellness, spa, chiropractic, and integrative health clinics, offering tools for scheduling, payments, client management, and inventory tracking. It supports basic EMR functions like SOAP notes and custom forms, making it suitable for functional medicine practices that emphasize services, supplements, and client retention. However, it lacks specialized features for advanced functional medicine workflows such as lab result integrations or protocol builders.

Pros

  • Intuitive scheduling with online booking and automated reminders
  • Strong inventory management for tracking and selling supplements
  • Integrated marketing tools including email/SMS campaigns

Cons

  • Limited depth in EHR/charting for complex functional medicine cases
  • No native integrations with functional labs or advanced testing platforms
  • Customization options are basic, requiring workarounds for specialized protocols

Best For

Small wellness or integrative clinics practicing lighter functional medicine with a focus on services, supplements, and client marketing.

Pricing

Starts at $165/month for solo practitioners (Essentials plan), scales to $299+/month for advanced features and multi-provider setups; additional fees for e-commerce and premium add-ons.

Visit ClinicSenseclinicsense.com
9
WellnessLiving logo

WellnessLiving

enterprise

All-in-one business platform for wellness and functional medicine clinics handling bookings, payments, marketing, and memberships.

Overall Rating7.1/10
Features
6.5/10
Ease of Use
8.4/10
Value
7.2/10
Standout Feature

Integrated marketing automation that automatically nurtures leads and re-engages clients based on attendance and purchase history

WellnessLiving is an all-in-one cloud-based business management platform tailored for wellness businesses like gyms, spas, and holistic centers. It provides tools for online scheduling, payment processing, membership management, marketing automation, and client engagement. While versatile for general wellness operations, it lacks deep specialization in functional medicine features such as advanced EHR, lab integrations, or personalized patient treatment tracking.

Pros

  • Comprehensive scheduling and online booking with calendar syncing
  • Built-in marketing automation for email/SMS campaigns
  • HIPAA-compliant options available for client data handling

Cons

  • Limited functional medicine-specific tools like lab result imports or biomarker tracking
  • No native EHR or customizable patient charting for complex protocols
  • Pricing scales quickly with add-ons and multiple locations

Best For

Functional medicine practitioners or wellness centers focused on group classes, coaching, and client retention rather than intensive medical case management.

Pricing

Starts at $69/month (Starter plan) up to $249+/month (Elite), plus per-client fees; annual billing discounts available.

Visit WellnessLivingwellnessliving.com
10
Mindbody logo

Mindbody

enterprise

Enterprise software for wellness businesses including functional medicine with class scheduling, client management, and e-commerce.

Overall Rating6.2/10
Features
5.7/10
Ease of Use
7.8/10
Value
5.9/10
Standout Feature

Comprehensive class and appointment booking system with waitlists and automated reminders tailored for wellness businesses

Mindbody is a cloud-based business management platform tailored for fitness, wellness, and beauty industries, providing tools for appointment scheduling, client management, payment processing, and marketing. In the context of functional medicine software, it excels in operational aspects like booking holistic sessions or group classes but falls short on specialized clinical features such as EHR documentation, lab integrations, or personalized treatment protocol builders. It serves as a general-purpose tool adaptable for wellness-oriented functional medicine practices rather than comprehensive patient care management.

Pros

  • Intuitive scheduling and online booking for appointments and classes
  • Seamless payment processing and invoicing
  • Built-in marketing tools like email campaigns and client retention features

Cons

  • Lacks functional medicine-specific tools like lab result integrations or symptom trackers
  • No robust EHR or HIPAA-compliant medical charting for clinical notes
  • Pricing structure can become costly with add-on fees and per-client charges

Best For

Functional medicine practitioners running wellness studios or group programs who need strong scheduling and business management over deep clinical functionality.

Pricing

Tiered plans start at $129/month for core software, plus per-active-client fees ($2.49+), transaction fees, and premium add-ons; enterprise custom pricing available.

Visit Mindbodymindbodyonline.com

Conclusion

This review of the top 10 functional medicine software underscores Power2Practice as the leading choice, boasting a comprehensive EHR and practice management platform with genomics integration and personalized care tools tailored for functional medicine practitioners. Practice Better and Healthie, while ranking second and third, excel as strong alternatives, offering all-in-one solutions and modern EMR features that cater to diverse practice needs. Ultimately, the best software depends on specific workflows, but Power2Practice remains the top pick for those seeking a fully integrated, practitioner-focused tool.

Power2Practice logo
Our Top Pick
Power2Practice

Take the first step toward optimizing your practice—explore Power2Practice today to leverage its seamless integration of EHR, genomics tools, and personalized care management, designed to enhance efficiency and elevate patient outcomes.