GITNUXBEST LIST

Biotechnology Pharmaceuticals

Top 10 Best Regulatory Submission Tracking Software of 2026

Discover top regulatory submission tracking software to streamline processes. Explore best tools for efficient submission management—start using today!

Rajesh Patel

Rajesh Patel

Feb 11, 2026

10 tools comparedExpert reviewed
Independent evaluation · Unbiased commentary · Updated regularly
Learn more
In life sciences, efficient regulatory submission tracking is critical to accelerating time-to-market while ensuring compliance with global agencies—a challenge愈发 demanding as regulatory landscapes evolve. The tools below represent the pinnacle of innovation, tailored to streamline end-to-end submission workflows, leveraging advanced features to manage complexity effectively.

Quick Overview

  1. 1#1: Veeva Vault Submissions - Cloud platform for end-to-end regulatory submission management, publishing, tracking, and compliance in life sciences.
  2. 2#2: MasterControl - Comprehensive quality management system with regulatory submission tracking, document control, and audit capabilities.
  3. 3#3: Greenlight Guru - MedTech-specific eQMS for managing design controls, risk, and regulatory submissions to FDA and other agencies.
  4. 4#4: Qualio - Modern eQMS platform streamlining regulatory documentation, submissions, and quality processes for life sciences companies.
  5. 5#5: TrackWise Digital - Enterprise quality management solution for tracking regulatory submissions, CAPA, and compliance workflows.
  6. 6#6: EXTEDO eCTDmanager - Specialized tool for eCTD submission creation, validation, publishing, and lifecycle tracking.
  7. 7#7: Dot Compliance - Cloud-based QMS with automated regulatory submission tracking, validation, and reporting for biotech and pharma.
  8. 8#8: SimplerQMS - eQMS designed for life sciences to manage documents, submissions, and regulatory compliance in one platform.
  9. 9#9: Ennov Regulatory - Regulatory suite for submission planning, dossier management, and tracking across global agencies.
  10. 10#10: LifeSphere RIM - Regulatory information management system for submission tracking, health authority interactions, and portfolio oversight.

These tools were rigorously evaluated based on functionality breadth, user experience, compliance reliability, and value proposition, ensuring they meet the diverse needs of life sciences organizations, from biotech startups to enterprise pharma.

Comparison Table

Navigating the landscape of regulatory submission tracking software can be complex; this comparison table simplifies the process by evaluating top tools like Veeva Vault Submissions, MasterControl, Greenlight Guru, Qualio, TrackWise Digital, and more. Readers will gain insights into key functionalities, integration capabilities, and user-centric advantages to identify the best fit for their workflow needs, whether for streamlining submissions, ensuring compliance, or enhancing collaboration.

Cloud platform for end-to-end regulatory submission management, publishing, tracking, and compliance in life sciences.

Features
9.8/10
Ease
8.7/10
Value
9.2/10

Comprehensive quality management system with regulatory submission tracking, document control, and audit capabilities.

Features
9.5/10
Ease
8.1/10
Value
8.4/10

MedTech-specific eQMS for managing design controls, risk, and regulatory submissions to FDA and other agencies.

Features
9.2/10
Ease
8.1/10
Value
8.0/10
4Qualio logo7.4/10

Modern eQMS platform streamlining regulatory documentation, submissions, and quality processes for life sciences companies.

Features
7.0/10
Ease
8.8/10
Value
7.2/10

Enterprise quality management solution for tracking regulatory submissions, CAPA, and compliance workflows.

Features
8.6/10
Ease
7.4/10
Value
7.7/10

Specialized tool for eCTD submission creation, validation, publishing, and lifecycle tracking.

Features
9.2/10
Ease
7.6/10
Value
8.0/10

Cloud-based QMS with automated regulatory submission tracking, validation, and reporting for biotech and pharma.

Features
7.8/10
Ease
8.4/10
Value
7.2/10
8SimplerQMS logo7.6/10

eQMS designed for life sciences to manage documents, submissions, and regulatory compliance in one platform.

Features
7.2/10
Ease
8.4/10
Value
7.8/10

Regulatory suite for submission planning, dossier management, and tracking across global agencies.

Features
8.7/10
Ease
7.4/10
Value
7.9/10

Regulatory information management system for submission tracking, health authority interactions, and portfolio oversight.

Features
8.5/10
Ease
7.0/10
Value
7.5/10
1
Veeva Vault Submissions logo

Veeva Vault Submissions

enterprise

Cloud platform for end-to-end regulatory submission management, publishing, tracking, and compliance in life sciences.

Overall Rating9.6/10
Features
9.8/10
Ease of Use
8.7/10
Value
9.2/10
Standout Feature

Unified single-source-of-truth platform with AI-driven validation and automated publishing across global standards

Veeva Vault Submissions is a cloud-native platform that streamlines the entire regulatory submission lifecycle for life sciences organizations, from planning and authoring to review, validation, and publishing in formats like eCTD, IDMP, and NeES. It ensures global regulatory compliance with built-in support for FDA, EMA, and other agencies, while integrating seamlessly with Veeva's broader Vault RIM suite for unified content management. The solution leverages AI-driven automation for milestone tracking, quality checks, and real-time collaboration, reducing submission errors and timelines significantly.

Pros

  • Comprehensive end-to-end workflow automation for submissions
  • Seamless integration with Veeva Vault ecosystem and third-party tools
  • Robust compliance validation and AI-powered error detection

Cons

  • Steep initial learning curve and configuration complexity
  • High enterprise-level pricing not suited for small firms
  • Implementation timelines can extend 6-12 months

Best For

Large pharmaceutical, biotech, and medtech companies handling high-volume, multi-regional regulatory submissions.

Pricing

Custom enterprise subscription pricing; typically starts at $200,000+ annually based on users, submissions volume, and modules.

2
MasterControl logo

MasterControl

enterprise

Comprehensive quality management system with regulatory submission tracking, document control, and audit capabilities.

Overall Rating9.2/10
Features
9.5/10
Ease of Use
8.1/10
Value
8.4/10
Standout Feature

Integrated Regulatory Excellence module for automated global submission tracking, milestone management, and real-time health authority engagement within a unified QMS platform

MasterControl is a comprehensive enterprise quality management system (eQMS) designed for regulated industries, with strong capabilities in regulatory submission tracking for life sciences, manufacturing, and medical devices. It enables users to manage submission dossiers, track milestones and timelines, automate approval workflows, and maintain compliance with standards like FDA 21 CFR Part 11, EMA, and ISO. The platform integrates document control, electronic signatures, and reporting to streamline regulatory affairs processes from planning to post-submission monitoring.

Pros

  • Robust compliance tools with full audit trails and electronic signatures for global regulatory standards
  • Highly customizable workflows for submission planning, tracking, and health authority interactions
  • Seamless integration with other QMS modules like CAPA, training, and document control

Cons

  • Complex initial setup and configuration requiring significant IT involvement
  • Enterprise-level pricing that may be prohibitive for smaller organizations
  • User interface feels dated compared to more modern SaaS competitors

Best For

Large pharmaceutical, biotech, and medical device companies requiring a scalable, fully integrated platform for end-to-end regulatory submission management and compliance.

Pricing

Custom enterprise pricing upon request; typically starts at $50,000+ annually depending on modules, users, and deployment (cloud or on-premise).

Visit MasterControlmastercontrol.com
3
Greenlight Guru logo

Greenlight Guru

specialized

MedTech-specific eQMS for managing design controls, risk, and regulatory submissions to FDA and other agencies.

Overall Rating8.7/10
Features
9.2/10
Ease of Use
8.1/10
Value
8.0/10
Standout Feature

Built-for-medtech QMS with pre-configured FDA submission workflows and DHF automation

Greenlight Guru is a cloud-based electronic Quality Management System (eQMS) tailored for medical device companies, enabling efficient management of regulatory submissions such as 510(k), PMA, and Technical Files. It centralizes document control, design history files (DHF), risk management, and CAPA processes to ensure compliance with FDA 21 CFR Part 11, ISO 13485, and EU MDR requirements. The platform tracks submission status, automates workflows, and provides audit-ready trails to accelerate regulatory approvals.

Pros

  • Med device-specific templates and workflows optimized for FDA submissions
  • Robust compliance features including electronic signatures and audit trails
  • Seamless integration with PLM and ERP systems for end-to-end tracking

Cons

  • Steeper learning curve for non-QMS users focused only on submissions
  • Enterprise pricing may not suit very small startups
  • Less emphasis on pharma eCTD compared to pure submission tools

Best For

Medical device companies needing an integrated eQMS to prepare, track, and maintain regulatory submissions throughout the product lifecycle.

Pricing

Quote-based enterprise pricing; typically $20,000–$100,000+ annually depending on users, modules, and company size.

Visit Greenlight Gurugreenlight.guru
4
Qualio logo

Qualio

specialized

Modern eQMS platform streamlining regulatory documentation, submissions, and quality processes for life sciences companies.

Overall Rating7.4/10
Features
7.0/10
Ease of Use
8.8/10
Value
7.2/10
Standout Feature

Clipboard feature for instant document actions and collaborative reviews, accelerating submission-ready document approvals

Qualio is a cloud-based electronic Quality Management System (eQMS) designed for life sciences companies, focusing on document control, change management, CAPA, training, and supplier management to ensure regulatory compliance. For regulatory submission tracking, it offers strong document lifecycle management with version control, automated workflows, electronic signatures, and full audit trails compliant with FDA 21 CFR Part 11, EU Annex 11, and ISO 13485. However, it lacks specialized tools for eCTD assembly, submission publishing, or real-time tracking of agency acknowledgments and review statuses, requiring integrations for full submission workflows. It's best suited as a foundational QMS that supports submission preparation rather than end-to-end tracking.

Pros

  • Intuitive interface with quick setup and minimal training required
  • Robust compliance features including audit trails and electronic signatures for regulated documents
  • Seamless integration with tools like Jira, Slack, and lab systems for workflow efficiency

Cons

  • No native eCTD formatting or submission publishing capabilities
  • Limited real-time tracking of regulatory agency interactions or submission statuses
  • Custom integrations needed for advanced submission lifecycle management

Best For

Small to mid-sized biotech and pharma companies needing compliant document management to support regulatory submission preparation within a broader QMS.

Pricing

Quote-based pricing starting around $1,200/month for small teams (10-50 users), scaling with users and modules; annual contracts common.

Visit Qualioqualio.com
5
TrackWise Digital logo

TrackWise Digital

enterprise

Enterprise quality management solution for tracking regulatory submissions, CAPA, and compliance workflows.

Overall Rating8.1/10
Features
8.6/10
Ease of Use
7.4/10
Value
7.7/10
Standout Feature

AI-powered predictive intelligence that forecasts submission delays and compliance risks in real-time

TrackWise Digital by Honeywell is a cloud-based enterprise quality management system (QMS) tailored for life sciences industries, featuring modules for regulatory submission tracking, including planning, milestone management, and eCTD compilation support. It enables centralized tracking of submissions to agencies like FDA and EMA, with automated workflows, collaboration tools, and real-time reporting for compliance. The platform integrates AI-driven analytics to predict delays and risks, ensuring audit-ready documentation across the regulatory lifecycle.

Pros

  • Highly configurable workflows for complex submission processes
  • Robust AI/ML analytics for risk prediction and automation
  • Strong integration with ERP, LIMS, and other enterprise systems

Cons

  • Steep learning curve due to extensive customization options
  • Enterprise-level pricing may not suit smaller organizations
  • Primarily QMS-focused, less specialized for pure submission tracking compared to niche tools

Best For

Large pharmaceutical, biotech, and medical device companies requiring an integrated QMS with comprehensive regulatory submission tracking.

Pricing

Custom enterprise subscription pricing, typically $100,000+ annually based on users, modules, and deployment scale; contact Honeywell for quotes.

6
EXTEDO eCTDmanager logo

EXTEDO eCTDmanager

specialized

Specialized tool for eCTD submission creation, validation, publishing, and lifecycle tracking.

Overall Rating8.4/10
Features
9.2/10
Ease of Use
7.6/10
Value
8.0/10
Standout Feature

Advanced Envelope Designer for customizable, standards-compliant dossier structuring and reuse

EXTEDO eCTDmanager is a specialized platform for regulatory professionals in the life sciences industry, designed to streamline the authoring, validation, assembly, and submission of electronic Common Technical Documents (eCTD). It supports ICH standards and regional variations (e.g., FDA, EMA), including lifecycle management, baseline building, and viewer functionalities. The software integrates with document management systems to ensure compliance and efficient tracking of submission processes across global regulatory agencies.

Pros

  • Robust validation engine with support for ICH v4.0 and regional specs
  • Comprehensive lifecycle management and envelope designer for complex dossiers
  • Scalable deployment options (cloud, on-premise) with strong integration capabilities

Cons

  • Steep learning curve for non-expert users
  • Enterprise pricing may be prohibitive for small organizations
  • Limited out-of-the-box reporting and analytics compared to broader RIM suites

Best For

Mid-to-large pharmaceutical and biotech companies managing high-volume, multi-regional eCTD submissions.

Pricing

Quote-based enterprise licensing; typically starts at $50,000+ annually depending on modules, users, and deployment.

7
Dot Compliance logo

Dot Compliance

specialized

Cloud-based QMS with automated regulatory submission tracking, validation, and reporting for biotech and pharma.

Overall Rating7.6/10
Features
7.8/10
Ease of Use
8.4/10
Value
7.2/10
Standout Feature

No-code workflow builder that allows rapid customization of compliance processes without IT involvement

Dot Compliance is a cloud-based Quality Management System (QMS) tailored for regulated industries like life sciences, focusing on streamlining compliance processes such as document control, training, CAPA, audits, and nonconformance management. It supports regulatory submission tracking through workflow automation, version control, and electronic signatures compliant with 21 CFR Part 11 and other standards. While effective for general compliance, its submission tracking is integrated within broader QMS functionalities rather than being a standalone specialized module.

Pros

  • Intuitive, no-code configuration for workflows and forms
  • Strong regulatory compliance with validation and audit trails
  • Scalable cloud platform suitable for GxP environments

Cons

  • Less specialized for advanced regulatory submission tracking like eCTD or dossier management
  • Customization may be needed for complex submission timelines
  • Pricing lacks transparency and can be higher for full feature sets

Best For

Small to mid-sized life sciences firms seeking an easy-to-use QMS with integrated basic submission tracking.

Pricing

Quote-based pricing starting at approximately $5,000/year for basic plans, scaling with users and modules.

Visit Dot Compliancedotcompliance.com
8
SimplerQMS logo

SimplerQMS

specialized

eQMS designed for life sciences to manage documents, submissions, and regulatory compliance in one platform.

Overall Rating7.6/10
Features
7.2/10
Ease of Use
8.4/10
Value
7.8/10
Standout Feature

Seamless Microsoft 365 integration for editing regulatory documents in Word/Excel within a validated, compliant environment

SimplerQMS is a cloud-based Quality Management System (QMS) designed for life sciences industries, focusing on document control, process automation, and regulatory compliance. It supports managing regulatory documentation through version control, electronic signatures, workflows, and audit trails compliant with 21 CFR Part 11 and ISO 13485. While effective for handling submission-related documents, it lacks specialized tools for eCTD publishing, submission planning, or agency milestone tracking, positioning it as a general QMS rather than a dedicated regulatory submission tracker.

Pros

  • Robust document management with GxP-compliant audit trails
  • Automated workflows for approvals and reviews
  • Native Microsoft 365 integration for familiar tools

Cons

  • Lacks dedicated eCTD validation and publishing
  • No built-in submission planning or regulatory intelligence
  • Custom pricing can be opaque and enterprise-focused

Best For

Life sciences companies needing compliant document control within a broader QMS, rather than specialized submission tracking.

Pricing

Quote-based subscription pricing; starts around $100-200/user/month depending on modules and scale (contact vendor).

Visit SimplerQMSsimplerqms.com
9
Ennov Regulatory logo

Ennov Regulatory

enterprise

Regulatory suite for submission planning, dossier management, and tracking across global agencies.

Overall Rating8.2/10
Features
8.7/10
Ease of Use
7.4/10
Value
7.9/10
Standout Feature

Advanced submission planning with interactive Gantt charts and automated dependency tracking

Ennov Regulatory is a comprehensive regulatory information management (RIM) platform tailored for life sciences organizations to manage the entire regulatory submission lifecycle. It enables planning, tracking, and execution of submissions across global authorities like FDA and EMA, with support for eCTD publishing and milestone management. The software integrates with other Ennov modules for a unified workflow, ensuring compliance and visibility into regulatory activities.

Pros

  • Robust global submission tracking with visual timelines and milestones
  • Seamless eCTD publishing and regulatory authority integrations
  • Scalable for enterprise-level regulatory teams with strong compliance tools

Cons

  • Steep learning curve due to complex interface
  • High implementation costs and customization needs
  • Limited out-of-box reporting without additional configuration

Best For

Large pharmaceutical and biotech companies handling complex, multi-regional regulatory submissions.

Pricing

Enterprise quote-based pricing starting at $50,000+ annually, depending on modules, users, and deployment.

10
LifeSphere RIM logo

LifeSphere RIM

enterprise

Regulatory information management system for submission tracking, health authority interactions, and portfolio oversight.

Overall Rating7.8/10
Features
8.5/10
Ease of Use
7.0/10
Value
7.5/10
Standout Feature

AI-driven regulatory timeline management with predictive analytics for submission risks and delays

LifeSphere RIM by ArisGlobal is a cloud-based Regulatory Information Management (RIM) platform designed to streamline regulatory submission tracking, planning, and management for life sciences companies. It provides end-to-end visibility into submission timelines, dossiers, variations, and renewals across global health authorities, with automated workflows and compliance tools. The software integrates regulatory intelligence and supports multi-region requirements, reducing manual efforts and enhancing submission success rates.

Pros

  • Comprehensive global submission tracking and planning tools
  • Strong integration with pharmacovigilance and safety systems
  • Robust regulatory intelligence and automation capabilities

Cons

  • Steep learning curve for new users
  • High implementation and customization costs
  • Limited flexibility for very small organizations

Best For

Mid-to-large pharmaceutical and biotech firms handling complex, multi-regional regulatory submissions.

Pricing

Custom enterprise SaaS pricing, typically starting at $100,000+ annually based on users, modules, and deployment scale.

Visit LifeSphere RIMarisglobal.com

Conclusion

Evaluating the best regulatory submission tracking tools reveals Veeva Vault Submissions as the clear top choice, excelling in end-to-end management for life sciences. MasterControl stands out with its comprehensive quality system, and Greenlight Guru proves strong for MedTech-specific needs, each offering unique value. The right tool depends on workflow, but Veeva Vault Submissions leads with its robust, dedicated platform.

Veeva Vault Submissions logo
Our Top Pick
Veeva Vault Submissions

Take the next step—explore Veeva Vault Submissions to enhance your regulatory processes and ensure seamless compliance.