GITNUXBEST LIST

Consumer Retail

Top 10 Best Online Store Inventory Management Software of 2026

Discover tools to streamline online store inventory. Compare top features and find the best software to boost efficiency.

Sarah Mitchell

Sarah Mitchell

Feb 11, 2026

10 tools comparedExpert reviewed
Independent evaluation · Unbiased commentary · Updated regularly
Learn more
Efficient inventory management is a cornerstone of successful online retail, directly impacting order accuracy, fulfillment speed, and customer satisfaction. With diverse tools tailored to specific needs—from multi-channel syncing to integration with leading platforms—choosing the right solution is key to scaling operations. The list of tools above distills the best options to empower businesses in this critical aspect of their workflow.

Quick Overview

  1. 1#1: Cin7 - Provides comprehensive multi-channel inventory management, order fulfillment, and real-time stock syncing for online stores across platforms like Shopify, Amazon, and eBay.
  2. 2#2: DEAR Inventory - Offers robust inventory control, purchasing, sales orders, and POS integration tailored for e-commerce businesses with multi-location support.
  3. 3#3: Zoho Inventory - Delivers affordable, cloud-based inventory tracking, order management, and seamless integrations with online stores like Shopify and WooCommerce.
  4. 4#4: QuickBooks Commerce - Manages inventory across multiple sales channels with automated fulfillment, B2B ordering, and accounting integrations for online retailers.
  5. 5#5: Katana MRP - Combines manufacturing resource planning with real-time inventory tracking and live sales channel syncing for growing online stores.
  6. 6#6: Linnworks - Centralizes inventory and order management for multi-channel e-commerce, supporting over 100 marketplaces and shopping carts.
  7. 7#7: Veeqo - Streamlines inventory, shipping, and warehouse management with AI-driven insights for Amazon sellers and other online channels.
  8. 8#8: Fishbowl - Advanced inventory software with QuickBooks integration, barcode scanning, and multi-location tracking for e-commerce operations.
  9. 9#9: inFlow Inventory - On-premise and cloud inventory management with sales, purchasing, and reporting features optimized for small to medium online stores.
  10. 10#10: Ordoro - Handles multi-channel inventory syncing, dropshipping, and fulfillment automation for e-commerce businesses of all sizes.

Tools were selected based on a rigorous evaluation of feature depth, user experience, reliability, and value, ensuring they deliver robust performance across e-commerce needs like fulfillment, reporting, and integration with popular sales channels.

Comparison Table

Efficient inventory management is critical for online businesses, and selecting the right software is essential to streamline operations. This comparison table explores popular tools like Cin7, DEAR Inventory, Zoho Inventory, QuickBooks Commerce, Katana MRP, and more, comparing key features, scalability, and integration options. Readers will learn how each tool aligns with different business sizes and operational needs to make an informed choice.

1Cin7 logo9.5/10

Provides comprehensive multi-channel inventory management, order fulfillment, and real-time stock syncing for online stores across platforms like Shopify, Amazon, and eBay.

Features
9.8/10
Ease
8.4/10
Value
9.1/10

Offers robust inventory control, purchasing, sales orders, and POS integration tailored for e-commerce businesses with multi-location support.

Features
9.3/10
Ease
7.8/10
Value
8.2/10

Delivers affordable, cloud-based inventory tracking, order management, and seamless integrations with online stores like Shopify and WooCommerce.

Features
9.2/10
Ease
8.1/10
Value
8.4/10

Manages inventory across multiple sales channels with automated fulfillment, B2B ordering, and accounting integrations for online retailers.

Features
9.1/10
Ease
7.6/10
Value
8.0/10
5Katana MRP logo8.7/10

Combines manufacturing resource planning with real-time inventory tracking and live sales channel syncing for growing online stores.

Features
9.2/10
Ease
8.4/10
Value
8.3/10
6Linnworks logo8.4/10

Centralizes inventory and order management for multi-channel e-commerce, supporting over 100 marketplaces and shopping carts.

Features
9.2/10
Ease
7.8/10
Value
8.0/10
7Veeqo logo8.7/10

Streamlines inventory, shipping, and warehouse management with AI-driven insights for Amazon sellers and other online channels.

Features
9.2/10
Ease
8.4/10
Value
9.4/10
8Fishbowl logo8.1/10

Advanced inventory software with QuickBooks integration, barcode scanning, and multi-location tracking for e-commerce operations.

Features
9.2/10
Ease
7.5/10
Value
7.8/10

On-premise and cloud inventory management with sales, purchasing, and reporting features optimized for small to medium online stores.

Features
8.5/10
Ease
7.9/10
Value
7.6/10
10Ordoro logo8.2/10

Handles multi-channel inventory syncing, dropshipping, and fulfillment automation for e-commerce businesses of all sizes.

Features
9.0/10
Ease
7.5/10
Value
7.8/10
1
Cin7 logo

Cin7

enterprise

Provides comprehensive multi-channel inventory management, order fulfillment, and real-time stock syncing for online stores across platforms like Shopify, Amazon, and eBay.

Overall Rating9.5/10
Features
9.8/10
Ease of Use
8.4/10
Value
9.1/10
Standout Feature

Matrix BOM (Bill of Materials) for handling complex product variants, bundles, and assemblies across all channels

Cin7 is a powerful inventory management platform designed for e-commerce businesses, providing real-time synchronization of stock levels across multiple online stores, marketplaces like Amazon and eBay, and physical retail locations. It automates order processing, purchase orders, and fulfillment workflows while offering advanced features like bundle management, lot and serial tracking, and comprehensive reporting. As a top-tier solution, it scales with growing operations, ensuring accurate inventory visibility to prevent stockouts and overselling.

Pros

  • Seamless multi-channel integrations with over 700 connectors including Shopify, WooCommerce, and QuickBooks
  • Real-time inventory syncing and automation to eliminate manual data entry
  • Robust B2B portal and advanced analytics for demand forecasting

Cons

  • Steep learning curve for complex setups due to extensive features
  • Pricing can be high for small businesses with low order volumes
  • Occasional performance lags with very high-volume operations

Best For

Mid-sized to enterprise e-commerce retailers managing inventory across multiple online stores, marketplaces, and physical locations.

Pricing

Starts at $349/month for Operations plan (billed annually), scaling to $599+/month for Professional and Enterprise tiers based on orders, users, and locations.

Visit Cin7cin7.com
2
DEAR Inventory logo

DEAR Inventory

enterprise

Offers robust inventory control, purchasing, sales orders, and POS integration tailored for e-commerce businesses with multi-location support.

Overall Rating8.7/10
Features
9.3/10
Ease of Use
7.8/10
Value
8.2/10
Standout Feature

Real-time, two-way synchronization across 100+ e-commerce, marketplace, and accounting platforms

DEAR Inventory (now part of Cin7) is a robust cloud-based inventory management platform optimized for e-commerce businesses, offering real-time synchronization across multiple online sales channels like Shopify, Amazon, eBay, and WooCommerce. It provides comprehensive tools for stock tracking, automated purchasing, order fulfillment, and multi-location inventory control. The software also supports light manufacturing, B2B sales portals, and seamless integrations with accounting systems such as QuickBooks and Xero.

Pros

  • Extensive multi-channel integrations for real-time inventory sync
  • Advanced automation for reordering, fulfillment, and reporting
  • Strong support for multi-location and B2B operations

Cons

  • Steep learning curve for non-expert users
  • Pricing escalates quickly for larger inventories or users
  • Occasional reports of integration delays or support responsiveness

Best For

Growing e-commerce businesses with multiple online sales channels requiring advanced inventory and order management.

Pricing

Starts at $225/month (Lite, billed annually) for basic features, up to $599/month (Advanced) and custom Enterprise plans; per-user scaling applies.

Visit DEAR Inventorydearsystems.com
3
Zoho Inventory logo

Zoho Inventory

specialized

Delivers affordable, cloud-based inventory tracking, order management, and seamless integrations with online stores like Shopify and WooCommerce.

Overall Rating8.6/10
Features
9.2/10
Ease of Use
8.1/10
Value
8.4/10
Standout Feature

Native multi-channel inventory synchronization across 50+ platforms without third-party apps

Zoho Inventory is a cloud-based solution tailored for online stores, providing real-time inventory tracking, order management, and fulfillment across multiple sales channels like Shopify, Amazon, WooCommerce, and eBay. It automates workflows for picking, packing, shipping, and returns while integrating with Zoho Books for seamless accounting. The platform also offers robust reporting, barcode scanning via mobile app, and tools for purchase order management to prevent stockouts and overstocking.

Pros

  • Extensive integrations with 50+ e-commerce platforms and marketplaces for multi-channel selling
  • Real-time inventory sync and automation reduce manual errors and stock discrepancies
  • Comprehensive fulfillment tools including serial/batch tracking and shipping label generation

Cons

  • Steeper learning curve for complex multi-warehouse setups
  • Advanced analytics and custom reports locked behind higher-tier plans
  • Customer support response times can vary, especially for free plan users

Best For

Small to medium online retailers with multi-channel sales needing robust automation and Zoho ecosystem integration.

Pricing

Free for up to 20 orders/month; paid plans from $29/month (Standard, 50 orders) to $199/month (Elite, 1,500 orders), with annual discounts and per-user add-ons.

Visit Zoho Inventoryzoho.com/inventory
4
QuickBooks Commerce logo

QuickBooks Commerce

enterprise

Manages inventory across multiple sales channels with automated fulfillment, B2B ordering, and accounting integrations for online retailers.

Overall Rating8.4/10
Features
9.1/10
Ease of Use
7.6/10
Value
8.0/10
Standout Feature

Deep native integration with QuickBooks Online for automatic syncing of sales, inventory, and financial data

QuickBooks Commerce is a robust inventory management solution designed for online stores, enabling real-time synchronization of stock levels across multiple sales channels like Shopify, Amazon, and eBay. It handles order fulfillment, purchasing, and multi-warehouse management while providing detailed reporting and analytics. Seamlessly integrated with QuickBooks accounting, it bridges e-commerce operations with financial tracking for scalable businesses.

Pros

  • Multi-channel inventory sync across 100+ platforms
  • Native QuickBooks integration for seamless accounting
  • Advanced automation for purchasing and fulfillment

Cons

  • Steep learning curve for advanced features
  • Higher costs for scaling enterprises
  • Limited UI customization options

Best For

Mid-sized e-commerce businesses selling on multiple online channels that require integrated inventory and accounting management.

Pricing

Starts at $39/month (Starter), $99/month (Essentials), $599/month (Advanced); billed annually with a 14-day free trial.

Visit QuickBooks Commercequickbooks.intuit.com/commerce
5
Katana MRP logo

Katana MRP

specialized

Combines manufacturing resource planning with real-time inventory tracking and live sales channel syncing for growing online stores.

Overall Rating8.7/10
Features
9.2/10
Ease of Use
8.4/10
Value
8.3/10
Standout Feature

Visual kanban production scheduling that auto-generates manufacturing orders from e-commerce sales

Katana MRP is a cloud-based manufacturing resource planning (MRP) software tailored for small to medium-sized manufacturers and wholesalers managing online store inventory. It offers real-time inventory tracking, automated production scheduling, and seamless integrations with e-commerce platforms like Shopify, WooCommerce, and Amazon to sync stock levels and prevent overselling. The platform visualizes operations through kanban-style boards, helping users plan manufacturing based on incoming sales orders.

Pros

  • Real-time multi-channel inventory syncing prevents stockouts
  • Automated production planning from sales orders
  • Strong integrations with e-commerce and accounting tools like QuickBooks

Cons

  • Learning curve for MRP features if not manufacturing-focused
  • Higher pricing for scaling businesses
  • Limited advanced analytics compared to pure inventory tools

Best For

Small to medium manufacturers selling via online stores who need integrated inventory and production management.

Pricing

Starts at $99/month (Maker plan, up to 50 orders/month), $299/month (Pro, 500 orders), $899/month (Business, 2,000 orders), with custom Enterprise pricing.

Visit Katana MRPkatanamrp.com
6
Linnworks logo

Linnworks

enterprise

Centralizes inventory and order management for multi-channel e-commerce, supporting over 100 marketplaces and shopping carts.

Overall Rating8.4/10
Features
9.2/10
Ease of Use
7.8/10
Value
8.0/10
Standout Feature

Deep multichannel integrations with automated inventory syncing across 100+ platforms

Linnworks is a powerful multichannel inventory and order management platform tailored for online retailers selling across multiple e-commerce sites like Amazon, eBay, Shopify, and over 100 other channels. It provides real-time inventory synchronization, automated order processing, fulfillment management, and detailed reporting to prevent overselling and streamline operations. The software also includes warehouse tools, custom automations, and analytics to support scaling businesses.

Pros

  • Extensive integrations with 100+ sales channels for seamless multichannel management
  • Robust automation rules and real-time inventory syncing to reduce errors
  • Scalable warehouse and fulfillment tools for high-volume operations

Cons

  • Steep learning curve and somewhat dated interface
  • Pricing lacks transparency and can get expensive for small sellers
  • Customer support response times can be inconsistent

Best For

Mid-sized to large e-commerce businesses managing inventory and orders across multiple online marketplaces.

Pricing

Subscription plans start at around $200/month based on order volume, with additional per-channel and per-order fees; custom enterprise pricing available.

Visit Linnworkslinnworks.com
7
Veeqo logo

Veeqo

specialized

Streamlines inventory, shipping, and warehouse management with AI-driven insights for Amazon sellers and other online channels.

Overall Rating8.7/10
Features
9.2/10
Ease of Use
8.4/10
Value
9.4/10
Standout Feature

Automated discounted shipping labels from 100+ carriers with one-click generation and batch processing

Veeqo is an all-in-one inventory management platform tailored for e-commerce sellers managing multiple online stores and marketplaces like Amazon, eBay, Shopify, and Walmart. It offers real-time inventory syncing across channels to prevent overselling, automated order fulfillment, and multi-warehouse support for efficient stock tracking. The software also excels in shipping automation with discounted labels from major carriers and provides purchasing, reporting, and analytics tools to optimize operations.

Pros

  • Seamless multi-channel inventory synchronization prevents stockouts
  • Automated shipping with deep discounts (up to 91% off USPS rates)
  • Intuitive dashboard and mobile app for on-the-go management

Cons

  • Reporting customization is somewhat limited without add-ons
  • Advanced features have a learning curve for beginners
  • Customer support response times can vary

Best For

Multi-channel e-commerce retailers focused on efficient inventory tracking and cost-saving shipping automation.

Pricing

Free for unlimited users, orders, and core inventory/shipping features; revenue via shipping discounts, with enterprise plans for high-volume needs.

Visit Veeqoveeqo.com
8
Fishbowl logo

Fishbowl

enterprise

Advanced inventory software with QuickBooks integration, barcode scanning, and multi-location tracking for e-commerce operations.

Overall Rating8.1/10
Features
9.2/10
Ease of Use
7.5/10
Value
7.8/10
Standout Feature

Two-way, real-time QuickBooks synchronization that automatically updates inventory, sales orders, and financials without manual entry

Fishbowl is a robust inventory management software designed for warehouses and multi-channel retailers, providing real-time tracking, order management, and barcode scanning capabilities. It seamlessly integrates with QuickBooks, Shopify, WooCommerce, and other e-commerce platforms to synchronize inventory across online stores and physical locations. With support for lot/serial tracking, manufacturing, and multi-warehouse operations, it's suited for businesses scaling beyond basic inventory needs.

Pros

  • Exceptional QuickBooks integration for seamless accounting sync
  • Multi-location and multi-channel inventory support
  • Advanced features like lot/serial tracking and manufacturing BOMs

Cons

  • Steep learning curve and complex interface
  • High upfront licensing costs
  • Limited intuitive mobile app experience

Best For

Mid-sized online retailers with complex, multi-warehouse operations and QuickBooks usage who need advanced inventory control.

Pricing

One-time license starts at ~$4,395 for standard edition (single user), plus ~$700 per additional user and 20% annual maintenance; hosted subscriptions from $439/month.

Visit Fishbowlfishbowlinventory.com
9
inFlow Inventory logo

inFlow Inventory

specialized

On-premise and cloud inventory management with sales, purchasing, and reporting features optimized for small to medium online stores.

Overall Rating8.1/10
Features
8.5/10
Ease of Use
7.9/10
Value
7.6/10
Standout Feature

Real-time multi-location inventory syncing with automatic low-stock alerts and purchase order generation

inFlow Inventory is a robust inventory management software tailored for small to medium-sized businesses handling both physical and online sales. It provides real-time stock tracking across multiple locations, automated purchase orders, and seamless integrations with e-commerce platforms like Shopify, Amazon, and WooCommerce. The tool excels in barcode scanning, sales order fulfillment, and detailed reporting to streamline online store inventory operations.

Pros

  • Excellent multi-channel integrations with major online marketplaces
  • Powerful barcode scanning and mobile app for on-the-go inventory management
  • Comprehensive reporting and real-time stock visibility across locations

Cons

  • Pricing can become expensive with additional users and advanced features
  • Steeper learning curve for complex setups compared to simpler tools
  • Limited built-in advanced analytics without third-party integrations

Best For

Small to medium retailers and wholesalers managing inventory across physical stores and multiple online sales channels.

Pricing

Starts at $89/month for Standard (1 user), $129/month for Premium (unlimited users), with Enterprise custom pricing; annual discounts available.

Visit inFlow Inventoryinflowinventory.com
10
Ordoro logo

Ordoro

specialized

Handles multi-channel inventory syncing, dropshipping, and fulfillment automation for e-commerce businesses of all sizes.

Overall Rating8.2/10
Features
9.0/10
Ease of Use
7.5/10
Value
7.8/10
Standout Feature

Automated purchasing engine that forecasts demand and generates purchase orders to suppliers

Ordoro is a robust inventory management platform tailored for multi-channel e-commerce sellers, providing real-time synchronization across platforms like Shopify, Amazon, eBay, and Walmart. It automates purchasing, order fulfillment, and shipping while supporting multi-warehouse operations and 3PL integrations. The software also includes tools for bundling, kitting, and detailed reporting to optimize inventory turnover.

Pros

  • Seamless multi-channel inventory sync prevents overselling
  • Automated PO generation and vendor management streamline replenishment
  • Strong shipping integrations with carriers like UPS and FedEx

Cons

  • Steep learning curve for advanced features
  • Pricing can be high for small businesses with low order volumes
  • Customization requires support team assistance

Best For

Mid-sized e-commerce businesses managing inventory across multiple online marketplaces and warehouses.

Pricing

Starts at $225/month (billed annually) for Growth plan (1,000 SKUs, 1,000 shipments); Scale at $599/month; Enterprise custom pricing.

Visit Ordoroordoro.com

Conclusion

Across the reviewed tools, Cin7 leads as the top choice, offering comprehensive multi-channel management and real-time stock syncing that streamline operations across major platforms. DEAR Inventory and Zoho Inventory follow closely, with DEAR excelling in multi-location and POS integration, and Zoho providing affordable, cloud-based tracking—each tailored to specific business needs. Together, these tools highlight the best in inventory management, ensuring online stores can scale efficiently.

Cin7 logo
Our Top Pick
Cin7

Don’t miss out on Cin7’s ability to centralize operations and keep stock accurate; start a trial today to experience why it stands above the rest for e-commerce success.