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Manufacturing Engineering

Top 10 Best Lot Control Software of 2026

Discover top 10 lot control software solutions. Compare features, find the right fit for your business. Get started now!

Sarah Mitchell

Sarah Mitchell

Feb 11, 2026

10 tools comparedExpert reviewed
Independent evaluation · Unbiased commentary · Updated regularly
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Effective lot control software is indispensable for ensuring traceability, compliance, and operational precision, enabling businesses to manage products from production to delivery with confidence. With a diverse range of tools available, selecting the right solution requires aligning with specific needs, and our list highlights top options to guide decision-making.

Quick Overview

  1. 1#1: MRPeasy - Cloud-based MRP software for small manufacturers offering complete lot traceability, expiration tracking, and production planning.
  2. 2#2: Fishbowl Inventory - Advanced inventory management system with robust lot, serial number, and matrix tracking for precise control.
  3. 3#3: Katana - Cloud MRP platform providing real-time lot tracking, inventory visibility, and manufacturing scheduling.
  4. 4#4: Cin7 - Multichannel inventory management software featuring lot and serial number control across sales channels.
  5. 5#5: Odoo - Open-source ERP with modular lot and serial tracking for full inventory traceability and compliance.
  6. 6#6: Unleashed - Real-time cloud inventory tool with multi-location lot tracking, expiry management, and reporting.
  7. 7#7: Zoho Inventory - Affordable online inventory solution supporting batch tracking, expiry alerts, and supply chain traceability.
  8. 8#8: Acctivate - QuickBooks-integrated inventory management with detailed lot and serial number tracking capabilities.
  9. 9#9: NetSuite - Cloud ERP platform delivering enterprise-grade lot management, traceability, and regulatory compliance.
  10. 10#10: SOS Inventory - QuickBooks add-on for inventory control featuring lot tracking, assemblies, and advanced reporting.

These tools were carefully chosen based on key features (including lot/serial tracking, expiration management, and planning), usability, reliability, and value, ensuring they deliver robust, adaptable solutions for modern inventory control challenges.

Comparison Table

This comparison table streamlines the selection of lot control software, featuring tools like MRPeasy, Fishbowl Inventory, Katana, Cin7, Odoo, and more. It outlines key capabilities, strengths, and practical use cases to help readers determine the best fit for their inventory management needs. Whether for small or large operations, the table equips users with clear insights to make informed choices.

1MRPeasy logo9.4/10

Cloud-based MRP software for small manufacturers offering complete lot traceability, expiration tracking, and production planning.

Features
9.7/10
Ease
8.9/10
Value
9.2/10

Advanced inventory management system with robust lot, serial number, and matrix tracking for precise control.

Features
9.4/10
Ease
8.2/10
Value
8.7/10
3Katana logo8.7/10

Cloud MRP platform providing real-time lot tracking, inventory visibility, and manufacturing scheduling.

Features
9.2/10
Ease
8.5/10
Value
8.0/10
4Cin7 logo8.2/10

Multichannel inventory management software featuring lot and serial number control across sales channels.

Features
8.7/10
Ease
7.6/10
Value
7.8/10
5Odoo logo8.2/10

Open-source ERP with modular lot and serial tracking for full inventory traceability and compliance.

Features
9.0/10
Ease
7.5/10
Value
9.2/10
6Unleashed logo8.2/10

Real-time cloud inventory tool with multi-location lot tracking, expiry management, and reporting.

Features
8.7/10
Ease
8.4/10
Value
7.9/10

Affordable online inventory solution supporting batch tracking, expiry alerts, and supply chain traceability.

Features
8.4/10
Ease
7.7/10
Value
8.9/10
8Acctivate logo8.1/10

QuickBooks-integrated inventory management with detailed lot and serial number tracking capabilities.

Features
8.6/10
Ease
7.4/10
Value
7.9/10
9NetSuite logo7.9/10

Cloud ERP platform delivering enterprise-grade lot management, traceability, and regulatory compliance.

Features
8.7/10
Ease
6.5/10
Value
7.1/10

QuickBooks add-on for inventory control featuring lot tracking, assemblies, and advanced reporting.

Features
8.4/10
Ease
7.6/10
Value
8.0/10
1
MRPeasy logo

MRPeasy

specialized

Cloud-based MRP software for small manufacturers offering complete lot traceability, expiration tracking, and production planning.

Overall Rating9.4/10
Features
9.7/10
Ease of Use
8.9/10
Value
9.2/10
Standout Feature

Comprehensive lot traceability matrix that visualizes connections between raw materials, production steps, and finished goods for instant recall and audit support

MRPeasy is a cloud-based MRP system renowned for its robust lot control capabilities, allowing manufacturers to track batches and lots from raw material receipt through production to shipment. It supports lot numbering, expiration date management, FEFO/FIFO dispatching, and generates full traceability reports for compliance with standards like FDA, ISO, and HACCP. The software integrates lot control seamlessly with inventory, production planning, and order management, minimizing errors and enabling quick recalls if needed.

Pros

  • Exceptional end-to-end lot traceability with visual matrices
  • Seamless integration of lot control into MRP workflows
  • Supports regulatory compliance with audit-ready reports

Cons

  • Full potential requires mastering broader MRP features
  • Pricing scales with number of users, less ideal for solos
  • Limited customization for highly specialized lot rules

Best For

Small to medium manufacturers in regulated industries like food, pharma, or electronics needing integrated lot tracking within production planning.

Pricing

Starts at $49/user/month (billed annually) for Production plan; scales to $99/user/month for Enterprise, with a free tier for basic use.

Visit MRPeasymrpeasy.com
2
Fishbowl Inventory logo

Fishbowl Inventory

specialized

Advanced inventory management system with robust lot, serial number, and matrix tracking for precise control.

Overall Rating9.1/10
Features
9.4/10
Ease of Use
8.2/10
Value
8.7/10
Standout Feature

Comprehensive lot traceability with expiration date alerts and one-click recall functionality

Fishbowl Inventory is a robust inventory management platform designed for small to mid-sized businesses, with strong capabilities in lot and serial number tracking for precise control and traceability. It supports expiration date management, FIFO/LIFO processing, and full lot history for compliance in industries like food, pharmaceuticals, and manufacturing. The software integrates seamlessly with QuickBooks and other platforms, enabling real-time inventory visibility across multiple locations.

Pros

  • Excellent lot and serial tracking with expiration and recall features
  • Deep integration with QuickBooks and e-commerce platforms
  • Supports multi-warehouse and manufacturing workflows

Cons

  • Steep learning curve for advanced features
  • Pricing can be high for very small operations
  • Reporting requires customization or add-ons

Best For

Mid-sized distributors and manufacturers requiring robust lot control and QuickBooks integration for traceability and compliance.

Pricing

Subscription starts at $439/month (billed annually); perpetual license from $4,395 plus ~20% annual maintenance.

Visit Fishbowl Inventoryfishbowlinventory.com
3
Katana logo

Katana

specialized

Cloud MRP platform providing real-time lot tracking, inventory visibility, and manufacturing scheduling.

Overall Rating8.7/10
Features
9.2/10
Ease of Use
8.5/10
Value
8.0/10
Standout Feature

Full lot traceability with one-click recall reports and audit trails

Katana (katana.io) is a cloud-based MRP and inventory management software designed for manufacturers, with strong lot control capabilities including batch tracking, serial number management, and full traceability. It enables real-time visibility into lot movements across production, inventory, and sales, supporting FEFO dispatching and compliance needs. Users can generate reports for recalls and audits, integrating seamlessly with e-commerce and accounting tools.

Pros

  • Comprehensive lot and serial number tracking with forward/backward traceability
  • FEFO and expiry date management for perishable goods
  • Strong integrations with Shopify, QuickBooks, and Xero

Cons

  • Limited customization for highly regulated industries like pharma
  • Advanced MRP features may overwhelm beginners
  • Higher-tier pricing required for multi-warehouse lot control

Best For

Small to medium manufacturers needing scalable lot tracking for traceability and efficiency without enterprise complexity.

Pricing

Starts at $99/month (Essentials) for basic lot tracking; $299/month (Professional) for advanced features; Enterprise custom pricing.

Visit Katanakatana.io
4
Cin7 logo

Cin7

specialized

Multichannel inventory management software featuring lot and serial number control across sales channels.

Overall Rating8.2/10
Features
8.7/10
Ease of Use
7.6/10
Value
7.8/10
Standout Feature

Automated lot traceability with 3-way inventory sync across sales channels, enabling precise expiry alerts and compliance reporting

Cin7 is a comprehensive cloud-based inventory management platform that includes robust lot and batch tracking capabilities for traceability in regulated industries like food, pharmaceuticals, and cosmetics. It enables businesses to manage expiration dates, serial numbers, and perform targeted recalls while syncing inventory across multiple sales channels, warehouses, and accounting systems. As a full-suite solution, it goes beyond basic lot control to offer real-time visibility and automation for complex supply chains.

Pros

  • Advanced lot/batch tracking with expiry management and recall tools
  • Seamless integration with e-commerce, POS, and ERP systems
  • Multi-warehouse support with real-time inventory syncing

Cons

  • Steep learning curve and complex initial setup
  • Pricing can be high for small businesses or basic lot control needs
  • Over-featured for users seeking simple, standalone lot tracking

Best For

Multi-channel retailers and distributors in traceability-focused industries needing integrated inventory management.

Pricing

Starts at $349/month for Core plan (billed annually), with higher tiers up to $999+/month based on order volume; includes setup fees and per-order charges.

Visit Cin7cin7.com
5
Odoo logo

Odoo

enterprise

Open-source ERP with modular lot and serial tracking for full inventory traceability and compliance.

Overall Rating8.2/10
Features
9.0/10
Ease of Use
7.5/10
Value
9.2/10
Standout Feature

Advanced multi-level lot traceability that tracks movements across the entire supply chain in a single dashboard

Odoo is a comprehensive open-source ERP platform with a powerful Inventory module that supports lot and serial number tracking for precise stock control. It enables businesses to manage lot assignments, expiration dates, quality checks, and full traceability from procurement to delivery. The system integrates lot control seamlessly with manufacturing, sales, and purchasing for end-to-end visibility.

Pros

  • Robust lot traceability with multi-level reporting and expiration management
  • Seamless integration with ERP modules like manufacturing and CRM
  • Free community edition with extensive customization options

Cons

  • Steep learning curve for initial configuration and advanced setup
  • Performance can lag with very large inventories without optimization
  • Enterprise add-ons required for premium features and support

Best For

Mid-sized manufacturers and distributors needing integrated ERP with strong lot tracking capabilities.

Pricing

Community edition free; Enterprise starts at $24.90/user/month (billed annually) with Inventory app included.

Visit Odooodoo.com
6
Unleashed logo

Unleashed

specialized

Real-time cloud inventory tool with multi-location lot tracking, expiry management, and reporting.

Overall Rating8.2/10
Features
8.7/10
Ease of Use
8.4/10
Value
7.9/10
Standout Feature

End-to-end batch traceability from supplier receipt to customer delivery, including automated recall workflows

Unleashed is a cloud-based inventory management software designed for wholesalers, manufacturers, and distributors, with strong capabilities in batch and lot tracking for full traceability. It enables users to assign batch numbers, manage expiry and best-before dates, and perform quick recalls to ensure compliance in regulated industries. The platform integrates seamlessly with accounting and e-commerce tools, providing real-time visibility across multiple locations.

Pros

  • Robust batch/lot tracking with expiry management and full traceability
  • Seamless integrations with Xero, QuickBooks, Shopify, and more
  • Multi-location inventory support with real-time updates

Cons

  • Pricing scales quickly with business size, potentially expensive for startups
  • Advanced customization requires setup time
  • Reporting tools lack depth for highly specialized lot analytics

Best For

Wholesalers and distributors in food, beverage, or cosmetics needing reliable lot traceability without complex ERP systems.

Pricing

Starts at $349 USD/month for small plans (up to 120 orders/month), scaling to $599+ for medium/large with higher volumes; annual billing discounts available.

Visit Unleashedunleashedsoftware.com
7
Zoho Inventory logo

Zoho Inventory

specialized

Affordable online inventory solution supporting batch tracking, expiry alerts, and supply chain traceability.

Overall Rating8.1/10
Features
8.4/10
Ease of Use
7.7/10
Value
8.9/10
Standout Feature

Real-time lot traceability with automated expiration notifications and recall workflows

Zoho Inventory is a cloud-based inventory management platform that provides robust lot and batch tracking capabilities, including expiration date management, traceability, and recall features for industries requiring precise inventory control. It supports multi-warehouse operations, serial number tracking, and integrates with e-commerce platforms, shipping carriers, and Zoho's ecosystem for end-to-end order fulfillment. While versatile for SMBs, it offers solid lot control without the depth of specialized enterprise solutions.

Pros

  • Comprehensive lot/batch tracking with expiration alerts and FIFO/LIFO support
  • Seamless integrations with Zoho apps, e-commerce, and accounting tools
  • Cost-effective with a free tier for small operations

Cons

  • Steeper learning curve due to feature density
  • Limited advanced compliance tools for highly regulated industries like pharma
  • Reporting customization lacks depth for complex lot analytics

Best For

Small to medium businesses in manufacturing, food, or retail needing affordable lot tracking with multi-channel sales support.

Pricing

Free plan for up to 20 online orders/month; paid plans start at $59/month (Standard) billed annually, up to $249/month (Elite).

Visit Zoho Inventoryzoho.com/inventory
8
Acctivate logo

Acctivate

specialized

QuickBooks-integrated inventory management with detailed lot and serial number tracking capabilities.

Overall Rating8.1/10
Features
8.6/10
Ease of Use
7.4/10
Value
7.9/10
Standout Feature

Advanced lot traceability engine for full forward/reverse tracking and compliance reporting

Acctivate is a robust inventory management software that integrates seamlessly with QuickBooks, offering comprehensive lot and serial number tracking for precise inventory control. It supports lot assignment at receipt, expiration date management, FIFO/LIFO lot costing, and full traceability for recalls and compliance. Designed for distributors and wholesalers, it provides detailed lot history reports and multi-location support to streamline operations.

Pros

  • Seamless QuickBooks integration for accounting and inventory sync
  • Strong lot traceability with recall capabilities and expiration tracking
  • Customizable reports and multi-location inventory support

Cons

  • Desktop-only Windows application with dated interface
  • Steep learning curve for advanced features
  • Pricing can be high for small businesses without QuickBooks

Best For

Small to mid-sized distributors and wholesalers relying on QuickBooks who require reliable lot control and traceability.

Pricing

Perpetual licenses start at ~$1,995 per concurrent user, plus ~20% annual maintenance; modular pricing available.

Visit Acctivateacctivate.com
9
NetSuite logo

NetSuite

enterprise

Cloud ERP platform delivering enterprise-grade lot management, traceability, and regulatory compliance.

Overall Rating7.9/10
Features
8.7/10
Ease of Use
6.5/10
Value
7.1/10
Standout Feature

Real-time lot traceability integrated with financials, procurement, and sales for complete supply chain compliance.

NetSuite is a comprehensive cloud-based ERP platform from Oracle that includes robust inventory management with lot control features for tracking batches, expiration dates, and traceability in industries like manufacturing, food, and pharmaceuticals. It enables lot-numbered inventory tracking, FIFO/LIFO methods, recall management, and compliance reporting, all integrated with finance, supply chain, and order fulfillment. While powerful for enterprise-scale operations, it functions as part of a broader suite rather than a standalone lot control tool.

Pros

  • Advanced lot tracking with expiration, recall, and compliance tools
  • Seamless integration across ERP modules for end-to-end visibility
  • Highly customizable via SuiteScript and workflows

Cons

  • Steep learning curve and complex setup
  • High cost unsuitable for small businesses
  • Overkill for pure lot control without needing full ERP

Best For

Mid-to-large enterprises in regulated industries requiring integrated lot control within a full ERP ecosystem.

Pricing

Quote-based enterprise pricing, typically $999+ base/month plus $99-$150 per user/month.

Visit NetSuitenetsuite.com
10
SOS Inventory logo

SOS Inventory

specialized

QuickBooks add-on for inventory control featuring lot tracking, assemblies, and advanced reporting.

Overall Rating7.8/10
Features
8.4/10
Ease of Use
7.6/10
Value
8.0/10
Standout Feature

Native QuickBooks Desktop and Online integration that automatically reconciles lot-tracked inventory with financial records

SOS Inventory is a cloud-based inventory management platform designed for small to mid-sized businesses, with robust lot control capabilities for tracking batches, expiration dates, and traceability in industries like food, pharmaceuticals, and manufacturing. It enables users to assign lots during receiving, manage them across multiple locations, and apply rules like FEFO (First Expired, First Out) for fulfillment. Deep integration with QuickBooks ensures inventory data syncs automatically with accounting, while supporting barcode scanning, custom reports, and reorder alerts.

Pros

  • Comprehensive lot tracking with expiration dates, FEFO logic, and full traceability from purchase to sale
  • Seamless QuickBooks integration for automated accounting sync
  • Multi-location inventory support and customizable reporting

Cons

  • Heavily reliant on QuickBooks integration, limiting standalone appeal
  • Interface feels somewhat dated compared to modern competitors
  • Advanced features may require a learning curve for non-accounting users

Best For

QuickBooks-using SMBs in regulated industries needing affordable lot tracking for perishable or batch-controlled inventory.

Pricing

Starts at $59.99/month (Lite, 1 user), $99.99/month (Pro, up to 3 users), $199.99/month (Advanced, up to 5 users), with Enterprise custom pricing.

Visit SOS Inventorysosinventory.com

Conclusion

After examining the top 10 lot control software options, MRPeasy stands out as the top choice, offering cloud-based functionality with complete lot traceability, expiration tracking, and production planning designed for small manufacturers. Fishbowl Inventory and Katana follow as strong alternatives, with Fishbowl excelling in advanced lot and serial number tracking and Katana providing real-time visibility and manufacturing scheduling to suit diverse operational needs. Each tool brings unique strengths, but MRPeasy leads with its comprehensive feature set tailored to optimize lot control processes.

MRPeasy logo
Our Top Pick
MRPeasy

Don’t miss out on MRPeasy—start exploring its robust lot traceability and production planning capabilities today, or consider Fishbowl or Katana if your needs focus on advanced tracking or real-time scheduling to find the perfect fit for your operations.