Top 10 Best Hospital Accounting Software of 2026

Epic Systems provides a comprehensive electronic health record (EHR) platform with integrated hospital accounting and financial management modules, handling revenue cycle management, billing, claims processing, general ledger, and financial reporting. Designed specifically for large healthcare organizations, it ensures seamless data flow between clinical operations and financial functions to optimize revenue capture and compliance. As the market leader, Epic's financial suite supports complex hospital accounting needs with robust automation and analytics.

Oracle Health is a comprehensive cloud-based platform offering integrated financial and accounting solutions tailored for healthcare organizations, including hospitals. It provides robust modules for general ledger, accounts payable/receivable, revenue cycle management, cost accounting, and financial reporting with healthcare-specific compliance features like HIPAA and Medicare reimbursement tracking. The system leverages AI and analytics for predictive financial insights and seamless integration with EHR and operational systems to streamline hospital accounting processes.

MEDITECH offers a comprehensive EHR platform with integrated financial and accounting modules tailored for hospitals, including general ledger, accounts payable/receivable, payroll, budgeting, and revenue cycle management. These tools ensure compliance with healthcare regulations like HIPAA and support complex billing for inpatient and outpatient services. As a full-suite solution, it streamlines financial operations while linking them directly to clinical data for improved accuracy and efficiency.

FinThrive offers a comprehensive revenue cycle management (RCM) platform with robust hospital accounting capabilities, including patient accounting, general ledger, accounts payable/receivable, and financial reporting tailored for healthcare providers. It integrates seamlessly with EHR systems to automate billing, claims management, and cash flow optimization. The software emphasizes data analytics for revenue integrity and compliance, helping hospitals reduce denials and accelerate reimbursements.

athenahealth is a cloud-based healthcare IT platform offering integrated electronic health records (EHR), practice management, and revenue cycle management (RCM) solutions designed for hospitals and ambulatory practices. For hospital accounting, it excels in automating billing, claims processing, payment posting, denial management, and financial reporting, ensuring seamless integration between clinical and financial data. The system leverages AI-driven insights and a vast provider network to optimize revenue capture and compliance with healthcare regulations.

Infor CloudSuite Healthcare is a comprehensive cloud-based ERP suite tailored for healthcare providers, offering robust accounting and financial management modules for hospitals. It handles core functions like general ledger, accounts payable/receivable, budgeting, and cost accounting, with healthcare-specific features such as revenue cycle management and payer contract modeling. The solution integrates with clinical systems to support compliance, reporting, and financial optimization in complex hospital environments.

SAP S/4HANA for Healthcare is a comprehensive ERP platform designed specifically for healthcare providers, offering advanced hospital accounting features like general ledger management, accounts payable/receivable, cost accounting, and revenue cycle management tailored to hospital operations. It leverages the in-memory HANA database for real-time financial reporting, analytics, and compliance with healthcare regulations such as HIPAA and payer contract management. The solution integrates seamlessly with clinical systems, patient administration, and supply chain modules to streamline financial workflows in complex healthcare environments.

Workday is a cloud-based enterprise platform providing comprehensive financial management for large organizations, including hospitals, with modules for general ledger, accounts payable/receivable, procurement, expenses, and financial reporting. It supports healthcare through Workday Healthcare extensions, offering revenue cycle insights, analytics, and integration with HR for workforce management. While robust for enterprise-scale accounting, it requires configuration for hospital-specific needs like patient billing and regulatory compliance.

Oracle NetSuite is a cloud-based ERP platform offering comprehensive financial management tools that can be adapted for hospital accounting needs, including general ledger, accounts payable/receivable, revenue recognition, and financial reporting. It supports complex billing and revenue cycle management through customizations and integrations with healthcare systems, providing real-time analytics and scalability for large organizations. While not natively tailored for hospitals, its flexibility allows compliance with standards like HIPAA via add-ons, making it suitable for enterprise-level healthcare financial operations.

Strata Decision Technology offers a cloud-based financial planning and analytics platform tailored for healthcare organizations, particularly hospitals, enabling strategic decision-making through budgeting, forecasting, and profitability analysis. It integrates with EHR systems and provides real-time insights into cost management, revenue cycle performance, and margin optimization. While not a traditional accounting ERP, it excels in financial performance tools to support hospital accounting teams in data-driven fiscal strategies.