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Manufacturing Engineering

Top 10 Best Eqms Software of 2026

Discover top 10 Eqms software solutions. Compare features, find the right fit. Explore now!

Sarah Mitchell

Sarah Mitchell

Feb 11, 2026

10 tools comparedExpert reviewed
Independent evaluation · Unbiased commentary · Updated regularly
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In regulated sectors, robust EQMS software is essential for managing compliance, quality processes, and risk—critical to operational integrity. With a spectrum of tools ranging from cloud-native platforms to life sciences-specific solutions, choosing the right EQMS directly impacts efficiency and accountability, a factor we’ve prioritized in identifying the options below.

Quick Overview

  1. 1#1: MasterControl - Comprehensive cloud-based EQMS platform for document control, CAPA, audits, and compliance in regulated industries.
  2. 2#2: ETQ Reliance - AI-powered quality management system excelling in CAPA, complaints, and supplier management with strong configurability.
  3. 3#3: Qualio - Modern eQMS designed for life sciences with intuitive eQMS for quality events, training, and document management.
  4. 4#4: ComplianceQuest - Salesforce-native EQMS offering end-to-end quality processes including audits, inspections, and risk management.
  5. 5#5: AssurX - Robust EQMS for enterprise-wide quality, risk, and compliance management with deep integration capabilities.
  6. 6#6: Veeva QualityOne - Cloud-based quality management solution tailored for life sciences with training, complaints, and CAPA modules.
  7. 7#7: TrackWise - Proven digital quality management system for CAPA, deviations, and audits in highly regulated environments.
  8. 8#8: Ideagen Quality Management - Integrated suite for quality assurance, document control, and risk management across industries.
  9. 9#9: Pilgrim Quality Solutions - Flexible EQMS platform supporting quality events, audits, and supplier quality in manufacturing and pharma.
  10. 10#10: Unipoint - Configurable quality management software for non-conformances, CAPA, and continuous improvement processes.

These tools were ranked based on key metrics including comprehensive feature sets, reliability in complex workflows, intuitive user experience, and overall value, ensuring they align with the diverse needs of regulated industries and operational demands.

Comparison Table

This comparison table provides a structured overview of top Eqms software solutions, featuring tools like MasterControl, ETQ Reliance, Qualio, ComplianceQuest, AssurX, and more. Readers will discover key capabilities, functionalities, and suitability for varied operational needs, aiding in informed decisions for their quality management requirements.

Comprehensive cloud-based EQMS platform for document control, CAPA, audits, and compliance in regulated industries.

Features
9.8/10
Ease
8.2/10
Value
8.7/10

AI-powered quality management system excelling in CAPA, complaints, and supplier management with strong configurability.

Features
9.5/10
Ease
8.4/10
Value
8.7/10
3Qualio logo8.7/10

Modern eQMS designed for life sciences with intuitive eQMS for quality events, training, and document management.

Features
9.0/10
Ease
9.2/10
Value
8.0/10

Salesforce-native EQMS offering end-to-end quality processes including audits, inspections, and risk management.

Features
9.2/10
Ease
7.8/10
Value
8.1/10
5AssurX logo8.3/10

Robust EQMS for enterprise-wide quality, risk, and compliance management with deep integration capabilities.

Features
8.8/10
Ease
7.6/10
Value
7.9/10

Cloud-based quality management solution tailored for life sciences with training, complaints, and CAPA modules.

Features
9.1/10
Ease
7.7/10
Value
7.9/10
7TrackWise logo8.3/10

Proven digital quality management system for CAPA, deviations, and audits in highly regulated environments.

Features
9.2/10
Ease
7.5/10
Value
7.8/10

Integrated suite for quality assurance, document control, and risk management across industries.

Features
8.6/10
Ease
7.4/10
Value
7.8/10

Flexible EQMS platform supporting quality events, audits, and supplier quality in manufacturing and pharma.

Features
8.5/10
Ease
7.7/10
Value
7.9/10
10Unipoint logo8.1/10

Configurable quality management software for non-conformances, CAPA, and continuous improvement processes.

Features
8.4/10
Ease
7.9/10
Value
8.0/10
1
MasterControl logo

MasterControl

enterprise

Comprehensive cloud-based EQMS platform for document control, CAPA, audits, and compliance in regulated industries.

Overall Rating9.5/10
Features
9.8/10
Ease of Use
8.2/10
Value
8.7/10
Standout Feature

Connected Quality platform that unifies disparate quality processes into a single, automated ecosystem for seamless oversight.

MasterControl is a comprehensive enterprise quality management system (EQMS) tailored for regulated industries like life sciences, manufacturing, and medical devices. It streamlines quality processes including document control, CAPA, audit management, training, complaints, and supplier management through automated workflows and robust compliance tools. The platform ensures adherence to standards such as FDA 21 CFR Part 11, ISO 13485, and GxP, while providing real-time analytics and reporting for proactive quality improvements.

Pros

  • Extensive feature set covering all EQMS needs with pre-built workflows
  • Superior regulatory compliance and validation support
  • Scalable cloud platform with strong integrations to ERP and MES systems

Cons

  • High implementation costs and time for full deployment
  • Steep learning curve for advanced modules
  • Pricing can be prohibitive for smaller organizations

Best For

Large enterprises in highly regulated industries requiring a fully validated, end-to-end EQMS solution.

Pricing

Custom quote-based pricing; typically starts at $25,000-$50,000 annually for mid-sized deployments, scaling with users and modules.

Visit MasterControlmastercontrol.com
2
ETQ Reliance logo

ETQ Reliance

enterprise

AI-powered quality management system excelling in CAPA, complaints, and supplier management with strong configurability.

Overall Rating9.1/10
Features
9.5/10
Ease of Use
8.4/10
Value
8.7/10
Standout Feature

No-code visual workflow builder for 100% customizable processes without developer involvement

ETQ Reliance is a cloud-based Enterprise Quality Management System (EQMS) that provides end-to-end solutions for quality processes including CAPA, audits, document control, complaints, supplier management, and risk assessment. It excels in regulated industries by offering no-code configurability to adapt workflows without programming. The platform integrates AI-driven insights via Reliance Ascend and supports compliance with ISO, FDA, and other standards, enabling scalable quality operations.

Pros

  • Highly configurable no-code workflows for custom processes
  • Robust analytics and AI-powered insights for proactive quality management
  • Seamless integrations with ERP, MES, and other enterprise systems

Cons

  • Steep learning curve for initial configuration
  • Enterprise pricing may be prohibitive for small organizations
  • User interface feels dated compared to newer SaaS platforms

Best For

Mid-to-large enterprises in regulated industries like manufacturing, life sciences, and automotive needing scalable, compliant EQMS.

Pricing

Quote-based enterprise pricing, typically starting at $50,000+ annually depending on modules and users.

3
Qualio logo

Qualio

specialized

Modern eQMS designed for life sciences with intuitive eQMS for quality events, training, and document management.

Overall Rating8.7/10
Features
9.0/10
Ease of Use
9.2/10
Value
8.0/10
Standout Feature

eQMS Studio: no-code customization tool for tailoring workflows and records without IT support

Qualio is a modern, cloud-based electronic Quality Management System (eQMS) designed specifically for life sciences companies in biotech, pharma, and medtech. It centralizes quality processes like document control, training management, quality events (CAPA, nonconformances, complaints), supplier management, and audits to ensure compliance with regulations such as 21 CFR Part 11, ISO 13485, and EU MDR. Qualio emphasizes rapid deployment with pre-validated configurations, enabling teams to go live in weeks rather than months.

Pros

  • Intuitive, modern user interface that reduces training time
  • Fast implementation with one-click validation packs
  • Strong integration capabilities with tools like Jira, Slack, and Google Workspace

Cons

  • Pricing can be steep for very small teams or startups
  • Advanced reporting and analytics require add-ons or custom work
  • Less suited for massive enterprises needing highly complex workflows

Best For

Growing life sciences companies (50-500 employees) seeking a scalable, user-friendly eQMS with quick time-to-value.

Pricing

Quote-based pricing, typically starting at $500-$1,000 per user per month depending on modules and team size; annual contracts common.

Visit Qualioqualio.com
4
ComplianceQuest logo

ComplianceQuest

enterprise

Salesforce-native EQMS offering end-to-end quality processes including audits, inspections, and risk management.

Overall Rating8.7/10
Features
9.2/10
Ease of Use
7.8/10
Value
8.1/10
Standout Feature

Native Salesforce platform integration for real-time quality data flow into CRM and customer processes

ComplianceQuest is a robust cloud-based Enterprise Quality Management System (EQMS) built natively on the Salesforce platform, enabling organizations to manage quality processes, regulatory compliance, and risk effectively. It provides end-to-end modules including CAPA, audits, complaints handling, document control, supplier management, and training, all with seamless CRM integration. Leveraging AI and automation, it streamlines workflows to support continuous improvement and ISO/ FDA compliance.

Pros

  • Highly customizable with Salesforce's low-code tools
  • Deep integration with Salesforce CRM for unified data
  • Comprehensive AI-driven analytics and automation for quality insights

Cons

  • Steep learning curve due to Salesforce complexity
  • Implementation requires expertise and time
  • Premium pricing may not suit smaller businesses

Best For

Mid-to-large enterprises using Salesforce that need scalable EQMS with strong CRM synergy.

Pricing

Quote-based enterprise pricing; typically starts at $75/user/month with modules, scaling by users and customization.

Visit ComplianceQuestcompliancequest.com
5
AssurX logo

AssurX

enterprise

Robust EQMS for enterprise-wide quality, risk, and compliance management with deep integration capabilities.

Overall Rating8.3/10
Features
8.8/10
Ease of Use
7.6/10
Value
7.9/10
Standout Feature

Unified Quality Event Management that automates and connects all quality processes from incident to resolution in one workflow

AssurX is a robust enterprise quality management system (EQMS) tailored for highly regulated industries like life sciences, manufacturing, and energy. It offers a unified platform for handling quality events, customer complaints, audits, CAPA processes, supplier management, and employee training. The software ensures compliance with standards such as FDA 21 CFR Part 11, ISO 13485, and GxP through configurable workflows, electronic signatures, and comprehensive audit trails.

Pros

  • Comprehensive coverage of quality processes in a single platform
  • Strong compliance tools and audit capabilities for regulated industries
  • Seamless integrations with ERP, MES, and other enterprise systems

Cons

  • Steep learning curve and complex initial configuration
  • High implementation time and costs
  • Less ideal for small businesses due to enterprise focus

Best For

Large enterprises in highly regulated sectors like pharma and manufacturing needing end-to-end quality management.

Pricing

Custom quote-based pricing; typically mid-five to six figures annually depending on modules, users, and deployment scale.

Visit AssurXassurx.com
6
Veeva QualityOne logo

Veeva QualityOne

specialized

Cloud-based quality management solution tailored for life sciences with training, complaints, and CAPA modules.

Overall Rating8.4/10
Features
9.1/10
Ease of Use
7.7/10
Value
7.9/10
Standout Feature

QualityOne Intelligence, providing AI-powered predictive analytics and automated risk prioritization across quality processes

Veeva QualityOne is a cloud-based Enterprise Quality Management System (EQMS) tailored for life sciences industries, offering modules for quality events, audits, complaints, CAPA, training, and supplier management. It integrates seamlessly with Veeva Vault for unified content and process management, ensuring compliance with regulations like FDA 21 CFR Part 11, GxP, and ISO standards. The platform emphasizes automation, risk-based workflows, and real-time analytics to streamline quality operations.

Pros

  • Deep compliance tools and pre-configured workflows for life sciences
  • Seamless integration with Veeva Vault and CRM ecosystem
  • Robust mobile access and AI-driven insights via QualityOne Intelligence

Cons

  • High cost prohibitive for small to mid-sized organizations
  • Steep learning curve and lengthy implementation
  • Less flexible for non-life sciences industries

Best For

Large pharmaceutical, biotech, and medical device companies requiring a highly compliant, integrated EQMS in the Veeva ecosystem.

Pricing

Custom enterprise subscription pricing, typically starting at $50,000+ annually based on users, modules, and deployment scale.

7
TrackWise logo

TrackWise

enterprise

Proven digital quality management system for CAPA, deviations, and audits in highly regulated environments.

Overall Rating8.3/10
Features
9.2/10
Ease of Use
7.5/10
Value
7.8/10
Standout Feature

No-code configuration engine that empowers quality teams to customize workflows without IT involvement

TrackWise by Honeywell is a robust Enterprise Quality Management System (EQMS) tailored for regulated industries like pharmaceuticals, biotechnology, and manufacturing. It streamlines quality processes through configurable modules for CAPA, complaints, audits, deviations, training, and document control. The platform ensures compliance with standards such as FDA 21 CFR Part 11, EU Annex 11, and ISO, with advanced workflow automation and analytics to mitigate risks and improve operational efficiency.

Pros

  • Highly configurable no-code/low-code workflows
  • Strong regulatory compliance and audit trail capabilities
  • Scalable for global enterprise deployments with robust integrations

Cons

  • Steep learning curve and complex initial setup
  • High implementation costs and timelines
  • User interface feels dated compared to modern SaaS alternatives

Best For

Large regulated organizations in life sciences and manufacturing requiring comprehensive compliance management at scale.

Pricing

Quote-based enterprise licensing; typically $100K+ annually for mid-sized deployments, scaling with users, modules, and customization.

Visit TrackWisehoneywell.com
8
Ideagen Quality Management logo

Ideagen Quality Management

enterprise

Integrated suite for quality assurance, document control, and risk management across industries.

Overall Rating8.1/10
Features
8.6/10
Ease of Use
7.4/10
Value
7.8/10
Standout Feature

Integrated EHSQ platform unifying quality, health, safety, and environmental management in one dashboard

Ideagen Quality Management is a robust enterprise quality management system (EQMS) platform that centralizes processes like document control, audits, CAPA, non-conformance management, and risk assessment. It supports compliance with standards such as ISO 9001, FDA regulations, and industry-specific requirements in sectors like manufacturing, life sciences, and aerospace. The software integrates EHSQ functionalities to provide a holistic view of quality, safety, and environmental performance.

Pros

  • Comprehensive modular suite covering full QMS lifecycle
  • Strong compliance and audit trail capabilities
  • Seamless integrations with ERP and other enterprise systems

Cons

  • Steep learning curve for complex configurations
  • Pricing can be high for smaller organizations
  • Mobile app functionality lags behind some competitors

Best For

Mid-to-large enterprises in regulated industries needing scalable, compliance-focused EQMS with EHSQ integration.

Pricing

Custom enterprise pricing via quote; typically starts at $10,000+ annually for mid-sized deployments, scaling with users and modules.

9
Pilgrim Quality Solutions logo

Pilgrim Quality Solutions

enterprise

Flexible EQMS platform supporting quality events, audits, and supplier quality in manufacturing and pharma.

Overall Rating8.1/10
Features
8.5/10
Ease of Use
7.7/10
Value
7.9/10
Standout Feature

Proactive Quality Event Management with risk-based prioritization and AI-driven insights

Pilgrim Quality Solutions, now part of Hexagon's SmartSolve EQMS platform, is a cloud-based enterprise quality management system tailored for regulated industries like life sciences and manufacturing. It provides end-to-end modules for CAPA, audits, complaints, supplier management, training, and document control, with highly configurable workflows and real-time dashboards. The software emphasizes compliance with FDA, ISO, and other standards while enabling proactive quality event management.

Pros

  • Highly configurable no-code workflows for customization
  • Comprehensive compliance tools with audit trails
  • Strong integration capabilities with ERP and other systems

Cons

  • Steep learning curve for advanced configurations
  • Pricing is quote-based and can be expensive for SMBs
  • Mobile app functionality is limited compared to competitors

Best For

Mid-to-large enterprises in highly regulated sectors needing scalable, configurable EQMS for complex quality processes.

Pricing

Custom enterprise subscription pricing starting around $50/user/month, depending on modules and scale; quote required.

10
Unipoint logo

Unipoint

specialized

Configurable quality management software for non-conformances, CAPA, and continuous improvement processes.

Overall Rating8.1/10
Features
8.4/10
Ease of Use
7.9/10
Value
8.0/10
Standout Feature

Advanced Quality Intelligence dashboard for real-time analytics and predictive insights

Unipoint is a robust Enterprise Quality Management System (EQMS) software tailored for regulated industries like manufacturing, aerospace, and medical devices. It provides essential modules for CAPA, non-conformance management, audits, document control, supplier quality, and calibration, ensuring compliance with ISO 9001, AS9100, and FDA standards. The platform offers configurable workflows and real-time reporting to drive continuous improvement and risk management.

Pros

  • Highly configurable modules for tailored quality processes
  • Strong compliance and audit trail capabilities
  • Seamless integration with ERP and MES systems

Cons

  • User interface feels dated compared to modern competitors
  • Steeper learning curve for advanced customizations
  • Limited native mobile app functionality

Best For

Mid-sized manufacturers in regulated industries needing customizable EQMS without enterprise-level complexity.

Pricing

Quote-based; typically starts at $15,000-$30,000 annually based on users, modules, and deployment (cloud or on-premise).

Visit Unipointunipoint.com

Conclusion

The reviewed EQMS tools deliver powerful solutions for quality, compliance, and process management, with MasterControl leading as the top choice, thanks to its all-encompassing cloud-based platform covering document control, CAPA, and audits. ETQ Reliance and Qualio stand as exceptional alternatives—ETQ Reliance for its AI-driven configurability in CAPA and supplier oversight, and Qualio for its user-friendly design tailored to life sciences quality events and training. Each option caters to distinct needs, proving that robust, industry-aligned EQMS is within reach for any organization.

MasterControl logo
Our Top Pick
MasterControl

Take the first step toward enhanced quality management—explore MasterControl to streamline compliance, boost efficiency, and keep your processes on track.