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Top 10 Best Ecommerce Warehouse Software of 2026

Discover top 10 ecommerce warehouse software to streamline operations. Compare features, find best fit, boost efficiency today.

Sarah Mitchell

Sarah Mitchell

Feb 11, 2026

10 tools comparedExpert reviewed
Independent evaluation · Unbiased commentary · Updated regularly
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In the competitive world of ecommerce, efficient warehouse management is critical for maintaining order accuracy, scaling operations, and meeting customer expectations. With a range of tools designed to handle everything from inventory tracking to multi-location fulfillment, choosing the right software can transform how businesses meet demand. Below, we highlight 10 leading solutions that excel in functionality, usability, and adaptability.

Quick Overview

  1. 1#1: ShipHero - Cloud-based warehouse management system optimized for ecommerce brands handling inventory, picking, packing, and shipping.
  2. 2#2: Logiwa - Digital WMS platform that automates warehouse operations for high-volume ecommerce fulfillment with real-time inventory control.
  3. 3#3: Cin7 - Integrated inventory and warehouse management software for multichannel ecommerce with order fulfillment automation.
  4. 4#4: Fishbowl - Warehouse inventory management solution that integrates with QuickBooks for ecommerce order processing and tracking.
  5. 5#5: DEAR Systems - Cloud inventory management system with warehouse features for ecommerce businesses including multi-location support.
  6. 6#6: Extensiv - Warehouse management software suite for 3PLs and ecommerce providers with visibility and analytics tools.
  7. 7#7: VeraCore - Flexible WMS designed for third-party logistics and ecommerce warehouse operations with customizable workflows.
  8. 8#8: Deposco - Ecommerce fulfillment platform with warehouse management capabilities for fast order processing and scalability.
  9. 9#9: Infoplus - Cloud WMS that streamlines ecommerce warehouse operations from receiving to shipping with robust integrations.
  10. 10#10: Brightpearl - Unified retail platform with warehouse management for ecommerce inventory control and order fulfillment.

We evaluated these tools based on core features (including automation, real-time visibility, and integration capabilities), technical reliability, ease of use for diverse teams, and value relative to pricing, ensuring they align with the needs of modern ecommerce operations.

Comparison Table

In the dynamic world of e-commerce, streamlined warehouse management is vital for optimizing operations and customer satisfaction. This comparison table explores leading solutions like ShipHero, Logiwa, Cin7, Fishbowl, DEAR Systems, and more, outlining key features and suitability to help readers identify the best fit for their business needs.

1ShipHero logo9.5/10

Cloud-based warehouse management system optimized for ecommerce brands handling inventory, picking, packing, and shipping.

Features
9.8/10
Ease
8.7/10
Value
9.2/10
2Logiwa logo9.2/10

Digital WMS platform that automates warehouse operations for high-volume ecommerce fulfillment with real-time inventory control.

Features
9.5/10
Ease
8.7/10
Value
9.0/10
3Cin7 logo8.7/10

Integrated inventory and warehouse management software for multichannel ecommerce with order fulfillment automation.

Features
9.2/10
Ease
7.8/10
Value
8.1/10
4Fishbowl logo8.1/10

Warehouse inventory management solution that integrates with QuickBooks for ecommerce order processing and tracking.

Features
8.7/10
Ease
7.2/10
Value
7.8/10

Cloud inventory management system with warehouse features for ecommerce businesses including multi-location support.

Features
9.2/10
Ease
8.1/10
Value
8.3/10
6Extensiv logo8.4/10

Warehouse management software suite for 3PLs and ecommerce providers with visibility and analytics tools.

Features
9.0/10
Ease
7.6/10
Value
8.0/10
7VeraCore logo8.4/10

Flexible WMS designed for third-party logistics and ecommerce warehouse operations with customizable workflows.

Features
9.1/10
Ease
7.8/10
Value
8.2/10
8Deposco logo8.3/10

Ecommerce fulfillment platform with warehouse management capabilities for fast order processing and scalability.

Features
8.7/10
Ease
8.0/10
Value
7.9/10
9Infoplus logo8.2/10

Cloud WMS that streamlines ecommerce warehouse operations from receiving to shipping with robust integrations.

Features
8.6/10
Ease
7.7/10
Value
8.0/10
10Brightpearl logo8.1/10

Unified retail platform with warehouse management for ecommerce inventory control and order fulfillment.

Features
8.7/10
Ease
7.6/10
Value
7.9/10
1
ShipHero logo

ShipHero

specialized

Cloud-based warehouse management system optimized for ecommerce brands handling inventory, picking, packing, and shipping.

Overall Rating9.5/10
Features
9.8/10
Ease of Use
8.7/10
Value
9.2/10
Standout Feature

Advanced 3PL Billing Engine with automated invoicing and client-specific reporting portals

ShipHero is a cloud-based warehouse management system (WMS) designed specifically for e-commerce brands and 3PL providers, offering end-to-end inventory control, order fulfillment, picking, packing, and shipping automation. It provides real-time visibility across multiple warehouses, seamless integrations with platforms like Shopify, Amazon, and BigCommerce, and advanced tools for wave planning and EDI compliance. The platform scales effortlessly for high-volume operations, making it ideal for businesses seeking operational efficiency without on-premise hardware.

Pros

  • Extensive integrations with 100+ e-commerce platforms and marketplaces
  • Real-time multi-warehouse inventory synchronization and wave-based picking for high efficiency
  • Robust 3PL tools including client portals, automated billing, and EDI support

Cons

  • Premium pricing may be steep for very small operations
  • Initial setup and learning curve for advanced customizations
  • Limited options for basic users without scaling needs

Best For

Mid-to-large e-commerce brands and 3PL providers managing high-volume, multi-channel fulfillment.

Pricing

Starts at $2,000/month for Starter plan (up to 5,000 orders), $3,000+/month for Pro, plus per-order fees; Enterprise custom pricing.

Visit ShipHeroshiphero.com
2
Logiwa logo

Logiwa

specialized

Digital WMS platform that automates warehouse operations for high-volume ecommerce fulfillment with real-time inventory control.

Overall Rating9.2/10
Features
9.5/10
Ease of Use
8.7/10
Value
9.0/10
Standout Feature

Order-centric workflow engine with AI-driven task optimization for real-time fulfillment efficiency

Logiwa is a cloud-native Warehouse Management System (WMS) designed specifically for high-volume e-commerce and omnichannel retail operations. It automates picking, packing, shipping, inventory control, and labor management across multiple warehouses with real-time visibility and scalability. The platform integrates seamlessly with major e-commerce platforms like Shopify, Amazon, and BigCommerce, enabling efficient fulfillment for growing DTC brands.

Pros

  • Scalable cloud architecture handles millions of orders without performance issues
  • Deep integrations with 100+ e-commerce and ERP systems
  • Advanced automation tools like voice picking and 3D warehouse visualization

Cons

  • Custom pricing lacks transparency and suits mid-to-enterprise only
  • Initial setup and configuration can take 3-6 months
  • Overkill for very small warehouses or low-volume operations

Best For

Mid-sized to large e-commerce businesses processing 10,000+ orders monthly across multiple channels.

Pricing

Custom quote-based pricing scaled by order volume, users, and warehouses; typically starts at $5,000+/month for mid-market.

Visit Logiwalogiwa.com
3
Cin7 logo

Cin7

enterprise

Integrated inventory and warehouse management software for multichannel ecommerce with order fulfillment automation.

Overall Rating8.7/10
Features
9.2/10
Ease of Use
7.8/10
Value
8.1/10
Standout Feature

Core Inventory Engine for handling complex stock scenarios like bundles, variants, and serial tracking across unlimited locations

Cin7 is a powerful cloud-based inventory and warehouse management platform designed for e-commerce businesses handling multi-channel sales. It provides real-time stock visibility across multiple warehouses, automates order fulfillment, purchasing, and integrations with platforms like Shopify, Amazon, and WooCommerce. The software excels in complex inventory scenarios, including bundles, matrix SKUs, and B2B operations, making it scalable for growing operations.

Pros

  • Extensive integrations with 700+ connectors for seamless multi-channel sync
  • Robust multi-warehouse and multi-location inventory management
  • Advanced reporting and automation for order processing and procurement

Cons

  • Steep learning curve for new users due to feature depth
  • Pricing can be expensive for smaller businesses scaling up
  • Occasional reports of slow customer support response times

Best For

Mid-sized e-commerce businesses with multiple sales channels, warehouses, and complex inventory needs requiring real-time synchronization.

Pricing

Starts at $349/month (Core plan) based on order volume, with higher tiers up to custom enterprise pricing; 14-day free trial available.

Visit Cin7cin7.com
4
Fishbowl logo

Fishbowl

specialized

Warehouse inventory management solution that integrates with QuickBooks for ecommerce order processing and tracking.

Overall Rating8.1/10
Features
8.7/10
Ease of Use
7.2/10
Value
7.8/10
Standout Feature

Native, bidirectional QuickBooks integration for automatic inventory and financial data syncing

Fishbowl is a robust inventory management and warehouse management system (WMS) tailored for small to midsize businesses, particularly those in ecommerce and manufacturing. It provides advanced features like multi-location inventory tracking, barcode scanning, lot and serial number control, order fulfillment, and production planning. The software stands out for its deep, native integration with QuickBooks, enabling seamless synchronization of inventory data with accounting without third-party connectors.

Pros

  • Seamless, real-time QuickBooks integration for inventory and accounting sync
  • Comprehensive warehouse tools including multi-location support, cycle counting, and barcode scanning
  • Powerful manufacturing module for bill of materials and production scheduling

Cons

  • Steep learning curve due to complex interface and extensive features
  • Dated user interface that feels clunky compared to modern cloud-native alternatives
  • High upfront costs for perpetual licenses and ongoing maintenance fees

Best For

QuickBooks-using ecommerce businesses with warehouse and light manufacturing needs seeking an on-premise or hosted WMS.

Pricing

Perpetual license starts at ~$4,395 plus ~$1,000/year maintenance; cloud subscription (Fishbowl One) from $169/user/month (billed annually).

Visit Fishbowlfishbowlinventory.com
5
DEAR Systems logo

DEAR Systems

enterprise

Cloud inventory management system with warehouse features for ecommerce businesses including multi-location support.

Overall Rating8.7/10
Features
9.2/10
Ease of Use
8.1/10
Value
8.3/10
Standout Feature

Real-time, bi-directional inventory synchronization across unlimited e-commerce channels and warehouses

DEAR Systems is a robust inventory and warehouse management software tailored for e-commerce businesses, providing real-time stock tracking, automated order fulfillment, and multi-warehouse operations. It excels in syncing inventory across platforms like Shopify, Amazon, WooCommerce, and eBay, while supporting picking, packing, shipping, and even light manufacturing processes. Ideal for scaling SMBs, it combines ERP-like features with user-friendly tools for efficient warehouse workflows.

Pros

  • Deep integrations with major e-commerce platforms for seamless inventory sync
  • Comprehensive warehouse tools including pick/pack/ship and multi-location support
  • Strong B2B and manufacturing capabilities alongside analytics dashboards

Cons

  • Pricing can be steep for very small operations
  • Initial setup and learning curve for complex configurations
  • Customer support response times vary during peak periods

Best For

Mid-sized e-commerce sellers managing multi-channel sales, multiple warehouses, and light manufacturing needs.

Pricing

Starts at $349 USD/month for Essentials (up to 150 orders/month), $599 for Professional, $999 for Advanced, with Enterprise custom pricing; annual discounts available.

Visit DEAR Systemsdear.systems
6
Extensiv logo

Extensiv

enterprise

Warehouse management software suite for 3PLs and ecommerce providers with visibility and analytics tools.

Overall Rating8.4/10
Features
9.0/10
Ease of Use
7.6/10
Value
8.0/10
Standout Feature

Advanced multi-tenant architecture for seamless management of multiple clients and warehouses in one unified platform

Extensiv is a cloud-based warehouse management system (WMS) tailored for 3PL providers, ecommerce fulfillment centers, and industrial warehouses. It delivers real-time inventory visibility, automated order processing, advanced billing, and seamless integrations with major ecommerce platforms like Shopify, Amazon, and carriers such as UPS and FedEx. The platform excels in multi-tenant environments, enabling efficient management of multiple clients and warehouses from a single interface.

Pros

  • Robust multi-tenant support for 3PLs managing multiple clients
  • Extensive integrations with ecommerce platforms and carriers
  • Real-time analytics and customizable reporting for operational insights

Cons

  • Steep learning curve for new users due to feature depth
  • Pricing is quote-based and can be costly for smaller operations
  • Heavy reliance on professional services for setup and customization

Best For

Mid-to-large ecommerce fulfillers and 3PL providers handling high-volume, multi-client warehouse operations.

Pricing

Custom quote-based pricing; typically starts at $500-$1,000/month for basic plans, scaling with order volume, users, and features.

Visit Extensivextensiv.com
7
VeraCore logo

VeraCore

enterprise

Flexible WMS designed for third-party logistics and ecommerce warehouse operations with customizable workflows.

Overall Rating8.4/10
Features
9.1/10
Ease of Use
7.8/10
Value
8.2/10
Standout Feature

Integrated 3PL billing engine that handles complex pricing tiers, surcharges, and automated invoicing

VeraCore is a comprehensive warehouse management system (WMS) tailored for eCommerce fulfillment, distributors, and 3PL providers, offering end-to-end control over inventory, order processing, picking, packing, and shipping. It supports multi-warehouse operations, real-time visibility, and seamless integrations with platforms like Shopify, Amazon, and EDI systems. Additional modules for CRM, billing, and reporting make it a full-suite solution for scaling operations.

Pros

  • Extensive integrations with eCommerce platforms and EDI
  • Advanced automation for picking, packing, and inventory management
  • Scalable for multi-warehouse and high-volume operations

Cons

  • Steep learning curve due to feature depth
  • Custom quote-based pricing lacks transparency
  • Interface feels dated compared to modern cloud-native tools

Best For

Mid-to-large eCommerce fulfillment centers and 3PLs needing robust, customizable WMS with integrated billing and CRM.

Pricing

Custom quote-based; typically starts at $5,000+/month for mid-sized deployments with implementation fees.

Visit VeraCoreveracore.com
8
Deposco logo

Deposco

specialized

Ecommerce fulfillment platform with warehouse management capabilities for fast order processing and scalability.

Overall Rating8.3/10
Features
8.7/10
Ease of Use
8.0/10
Value
7.9/10
Standout Feature

Patented flow-based warehouse orchestration for no-code automation of complex fulfillment workflows

Deposco is a cloud-based warehouse management system (WMS) tailored for ecommerce fulfillment, offering end-to-end order orchestration, inventory control, and shipping automation. It integrates seamlessly with major platforms like Shopify, Amazon, BigCommerce, and over 100 carriers to streamline multi-channel operations. The Bright Suite provides real-time visibility, wave planning, and no-code workflow customization for efficient scaling.

Pros

  • Extensive integrations with ecommerce platforms and carriers
  • Advanced automation for picking, packing, and optimization
  • Real-time analytics and inventory visibility

Cons

  • Pricing is quote-based with limited transparency
  • Best suited for mid-to-large operations, less ideal for startups
  • Initial setup may require professional services

Best For

Mid-sized ecommerce businesses managing high-volume, multi-channel orders that need scalable automation.

Pricing

Custom quote-based pricing, typically starting at $1,000-$5,000/month depending on volume, users, and features.

Visit Deposcodeposco.com
9
Infoplus logo

Infoplus

enterprise

Cloud WMS that streamlines ecommerce warehouse operations from receiving to shipping with robust integrations.

Overall Rating8.2/10
Features
8.6/10
Ease of Use
7.7/10
Value
8.0/10
Standout Feature

Advanced 3PL management with automated billing, customer portals, and EDI support for seamless partner invoicing.

Infoplus is a cloud-based warehouse management system (WMS) designed specifically for e-commerce and 3PL operations, providing end-to-end control over inventory, order fulfillment, picking, packing, and shipping. It offers real-time visibility, automation tools, and seamless integrations with major e-commerce platforms like Shopify, Amazon, and BigCommerce, as well as carriers such as UPS and FedEx. The platform supports multi-warehouse management, labor optimization, and advanced reporting to scale operations efficiently.

Pros

  • Extensive integrations with e-commerce marketplaces and shipping carriers
  • Real-time inventory tracking and multi-warehouse support
  • Robust automation for picking, packing, and 3PL billing

Cons

  • Steep learning curve for initial setup and customization
  • Pricing lacks transparency and can be costly for small volumes
  • Limited mobile app functionality compared to competitors

Best For

Mid-sized e-commerce businesses and 3PL providers needing scalable, feature-rich warehouse management for high-volume fulfillment.

Pricing

Custom subscription pricing based on order volume, users, and modules; typically starts at $600-$1,500/month for mid-tier plans with no long-term contracts.

Visit Infoplusinfopluscommerce.com
10
Brightpearl logo

Brightpearl

enterprise

Unified retail platform with warehouse management for ecommerce inventory control and order fulfillment.

Overall Rating8.1/10
Features
8.7/10
Ease of Use
7.6/10
Value
7.9/10
Standout Feature

Native multi-channel inventory synchronization with automated fulfillment across warehouses and 3PL partners

Brightpearl is a comprehensive cloud-based retail ERP platform with strong ecommerce warehouse management capabilities, offering real-time inventory tracking, automated picking and packing, and multi-warehouse support. It integrates seamlessly with major sales channels like Shopify, Amazon, and eBay, enabling efficient order fulfillment and stock visibility across locations. Designed for scaling retailers, it combines WMS with order management, CRM, and accounting for end-to-end operations.

Pros

  • Seamless multi-channel integrations for real-time order and inventory sync
  • Advanced automation for picking, packing, and shipping workflows
  • Robust multi-warehouse management with lot/serial tracking

Cons

  • Complex implementation requiring professional setup
  • Higher pricing not ideal for small businesses
  • Steeper learning curve due to ERP-like depth

Best For

Mid-sized multi-channel ecommerce retailers needing integrated warehouse management with full retail operations.

Pricing

Quote-based pricing; starts around $600/month for entry-level plans, scaling to thousands based on users, volume, and modules.

Visit Brightpearlbrightpearl.com

Conclusion

The reviewed ecommerce warehouse software options deliver robust solutions, with ShipHero leading as the top choice—optimized to handle inventory, picking, packing, and shipping for ecommerce brands. Logiwa and Cin7 stand out as strong alternatives, excelling in high-volume automation and multichannel integration, respectively, to suit specific operational needs. Together, these tools provide tailored ways to boost efficiency and scalability in warehouse management.

ShipHero logo
Our Top Pick
ShipHero

Take the first step to enhance your warehouse operations: try ShipHero’s streamlined platform and experience its impact on your business today.