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Top 10 Best 3Pl Warehouse Software of 2026

Discover the top 10 3PL warehouse software solutions. Compare features, ratings, and choose the best fit for your logistics needs. Read now!

Rajesh Patel

Rajesh Patel

Feb 11, 2026

10 tools comparedExpert reviewed
Independent evaluation · Unbiased commentary · Updated regularly
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3PL warehouse software is vital for streamlining multi-client operations, with features that span inventory management, order fulfillment, and client communication. Choosing the right tool—tailored to diverse workflows—ensures efficiency, scalability, and client satisfaction, which we’ve curated to highlight the industry’s top performers.

Quick Overview

  1. 1#1: Extensiv - Cloud-based warehouse management platform designed specifically for 3PL providers to manage multi-client inventory, orders, and billing seamlessly.
  2. 2#2: Logiwa - Digital-first WMS that empowers 3PL operations with real-time inventory visibility, automated picking, and scalable fulfillment for multiple clients.
  3. 3#3: Deposco - Integrated warehouse and order management software optimized for 3PLs to handle high-volume e-commerce fulfillment and client-specific workflows.
  4. 4#4: ShipHero - Comprehensive WMS for 3PL fulfillment centers offering inventory tracking, wave planning, and client portals for e-commerce brands.
  5. 5#5: Fishbowl - Inventory management and WMS solution with 3PL modules for multi-warehouse, multi-client tracking, and QuickBooks integration.
  6. 6#6: CartonCloud - All-in-one 3PL software combining warehouse management, transport, and CRM for efficient multi-client logistics operations.
  7. 7#7: Made4net - Flexible WMS platform tailored for 3PL and 3PL providers with advanced features for order consolidation and client segregation.
  8. 8#8: Manhattan Associates - Enterprise-grade cloud WMS supporting complex 3PL supply chains with AI-driven optimization and microservices architecture.
  9. 9#9: Körber Supply Chain - End-to-end supply chain software featuring HighJump WMS for high-performance 3PL warehousing and automation integration.
  10. 10#10: Blue Yonder - AI-powered warehouse management system enabling 3PLs to optimize labor, slotting, and throughput in dynamic multi-client environments.

Tools were selected based on their ability to deliver robust functionality (e.g., automation, real-time visibility), scalability, user experience, and value, balancing specialized features for 3PL providers with broad applicability across dynamic logistics environments.

Comparison Table

This comparison table examines popular 3PL warehouse software tools like Extensiv, Logiwa, Deposco, ShipHero, Fishbowl, and more, focusing on their core features and practical applications. Readers will gain insights into scalability, integration compatibility, and cost-efficiency, aiding informed choices to boost warehouse operations.

1Extensiv logo9.4/10

Cloud-based warehouse management platform designed specifically for 3PL providers to manage multi-client inventory, orders, and billing seamlessly.

Features
9.6/10
Ease
8.7/10
Value
9.2/10
2Logiwa logo9.2/10

Digital-first WMS that empowers 3PL operations with real-time inventory visibility, automated picking, and scalable fulfillment for multiple clients.

Features
9.4/10
Ease
8.7/10
Value
9.0/10
3Deposco logo8.7/10

Integrated warehouse and order management software optimized for 3PLs to handle high-volume e-commerce fulfillment and client-specific workflows.

Features
9.2/10
Ease
8.1/10
Value
8.4/10
4ShipHero logo8.6/10

Comprehensive WMS for 3PL fulfillment centers offering inventory tracking, wave planning, and client portals for e-commerce brands.

Features
9.2/10
Ease
8.0/10
Value
7.8/10
5Fishbowl logo7.8/10

Inventory management and WMS solution with 3PL modules for multi-warehouse, multi-client tracking, and QuickBooks integration.

Features
7.5/10
Ease
7.0/10
Value
8.5/10

All-in-one 3PL software combining warehouse management, transport, and CRM for efficient multi-client logistics operations.

Features
8.7/10
Ease
7.5/10
Value
7.9/10
7Made4net logo7.8/10

Flexible WMS platform tailored for 3PL and 3PL providers with advanced features for order consolidation and client segregation.

Features
8.2/10
Ease
7.4/10
Value
7.6/10

Enterprise-grade cloud WMS supporting complex 3PL supply chains with AI-driven optimization and microservices architecture.

Features
9.4/10
Ease
7.6/10
Value
8.1/10

End-to-end supply chain software featuring HighJump WMS for high-performance 3PL warehousing and automation integration.

Features
9.2/10
Ease
7.4/10
Value
8.0/10
10Blue Yonder logo8.4/10

AI-powered warehouse management system enabling 3PLs to optimize labor, slotting, and throughput in dynamic multi-client environments.

Features
9.1/10
Ease
7.6/10
Value
7.9/10
1
Extensiv logo

Extensiv

specialized

Cloud-based warehouse management platform designed specifically for 3PL providers to manage multi-client inventory, orders, and billing seamlessly.

Overall Rating9.4/10
Features
9.6/10
Ease of Use
8.7/10
Value
9.2/10
Standout Feature

Automated 3PL billing engine that generates client-specific invoices based on storage, fulfillment, and value-added services in real-time

Extensiv is a cloud-based Warehouse Management System (WMS) tailored for third-party logistics (3PL) providers, offering comprehensive tools for multi-client inventory tracking, order fulfillment, and warehouse operations. It excels in providing real-time visibility across multiple warehouses and clients, with robust automation for picking, packing, and shipping processes. The platform includes advanced billing, reporting, and client portal features that streamline 3PL-specific workflows. Extensive integrations with e-commerce platforms, ERPs, and carriers make it a scalable solution for growing logistics businesses.

Pros

  • Superior multi-tenant support for managing multiple 3PL clients with segregated data and custom billing
  • Real-time inventory visibility and analytics across distributed warehouses
  • Seamless integrations with 250+ carriers, e-commerce platforms, and ERPs

Cons

  • Steep learning curve for advanced features and custom configurations
  • Pricing can be premium for smaller 3PL operations
  • Occasional reports of customer support delays during peak implementation

Best For

Mid-sized to enterprise 3PL providers handling high-volume, multi-client fulfillment with complex billing needs.

Pricing

Custom subscription pricing starting at around $500/month for basic plans, scaling with order volume, users, and warehouses (quote-based).

Visit Extensivextensiv.com
2
Logiwa logo

Logiwa

specialized

Digital-first WMS that empowers 3PL operations with real-time inventory visibility, automated picking, and scalable fulfillment for multiple clients.

Overall Rating9.2/10
Features
9.4/10
Ease of Use
8.7/10
Value
9.0/10
Standout Feature

Multi-tenant 3PL client portals with real-time order tracking and customized billing

Logiwa is a cloud-native Warehouse Management System (WMS) designed specifically for 3PL providers and high-volume e-commerce fulfillment operations. It provides end-to-end warehouse automation, real-time inventory visibility, and multi-tenant client management to handle complex order fulfillment efficiently. Key capabilities include advanced picking strategies like zone picking, seamless integrations with e-commerce platforms and carriers, and labor optimization tools to boost productivity.

Pros

  • Scalable multi-tenant architecture ideal for 3PL with dedicated client portals
  • Advanced automation support including robotics, voice picking, and AI-driven optimization
  • Real-time analytics and reporting for superior inventory and operational visibility

Cons

  • Higher pricing suitable mainly for mid-to-large operations
  • Implementation can require customization and take 3-6 months
  • Limited built-in support for non-e-commerce verticals

Best For

Mid-to-large 3PL providers managing high-volume e-commerce fulfillment for multiple clients who need scalable automation and real-time control.

Pricing

Custom quote-based; typically starts at $1,000-$5,000/month based on order volume, warehouses, and features.

Visit Logiwalogiwa.com
3
Deposco logo

Deposco

specialized

Integrated warehouse and order management software optimized for 3PLs to handle high-volume e-commerce fulfillment and client-specific workflows.

Overall Rating8.7/10
Features
9.2/10
Ease of Use
8.1/10
Value
8.4/10
Standout Feature

Advanced 3PL billing engine that automates rate calculations, invoicing, and profitability analysis across client contracts

Deposco's FastPivot is a cloud-based warehouse management system (WMS) tailored for 3PL providers, enabling efficient management of multi-client operations with real-time inventory visibility and order fulfillment. It excels in automating complex billing processes, supporting EDI integrations, and providing scalable throughput for high-volume warehouses. The platform streamlines picking, packing, shipping, and reporting across diverse client needs.

Pros

  • Robust 3PL-specific billing automation that handles complex invoicing across clients
  • Strong real-time visibility and multi-warehouse support with EDI and carrier integrations
  • Scalable for growing 3PL operations with customizable workflows

Cons

  • Pricing can be premium and quote-based, less accessible for smaller 3PLs
  • Implementation may require configuration time and expertise
  • User interface, while intuitive, has a learning curve for advanced features

Best For

Mid-to-large 3PL providers managing multiple clients who need advanced billing and real-time operational control.

Pricing

Custom quote-based pricing, typically starting at $5,000+ per month for mid-sized operations, depending on volume, users, and modules.

Visit Deposcodeposco.com
4
ShipHero logo

ShipHero

specialized

Comprehensive WMS for 3PL fulfillment centers offering inventory tracking, wave planning, and client portals for e-commerce brands.

Overall Rating8.6/10
Features
9.2/10
Ease of Use
8.0/10
Value
7.8/10
Standout Feature

Multi-client dashboards and segregated inventory management, allowing 3PLs to provide branded portals for each customer's orders and stock levels.

ShipHero is a cloud-based warehouse management system (WMS) designed for 3PL providers and e-commerce brands, offering comprehensive tools for inventory management, order fulfillment, picking, packing, and shipping across multiple warehouses and clients. It excels in real-time inventory tracking, wave planning, and seamless integrations with platforms like Shopify, Amazon, and BigCommerce. Ideal for scaling 3PL operations, it supports multi-client segregation, EDI, and customizable workflows to handle high-volume DTC fulfillment efficiently.

Pros

  • Robust e-commerce integrations and multi-channel support
  • Multi-client and multi-warehouse management with segregated reporting
  • Advanced automation for picking, packing, and wave planning

Cons

  • Pricing scales steeply for low-volume or small 3PLs
  • Steep learning curve for complex customizations
  • Customer support can have variable response times

Best For

Mid-sized 3PL providers specializing in e-commerce fulfillment for multiple DTC brands with moderate to high order volumes.

Pricing

Tiered subscription starting at $1,995/month for Growth plan; custom Enterprise pricing based on order volume and features.

Visit ShipHeroshiphero.com
5
Fishbowl logo

Fishbowl

specialized

Inventory management and WMS solution with 3PL modules for multi-warehouse, multi-client tracking, and QuickBooks integration.

Overall Rating7.8/10
Features
7.5/10
Ease of Use
7.0/10
Value
8.5/10
Standout Feature

Seamless, bi-directional QuickBooks integration that automates inventory and financial data synchronization

Fishbowl is a comprehensive inventory management and warehouse control software tailored for small to mid-sized businesses, offering multi-location tracking, barcode scanning, and order fulfillment capabilities. It specializes in real-time inventory visibility, picking/packing/shipping workflows, and seamless integration with QuickBooks for accounting. While suitable for basic 3PL operations, it focuses on streamlined warehouse processes rather than advanced client-specific billing or enterprise-scale logistics.

Pros

  • Excellent QuickBooks integration for effortless accounting sync
  • Robust multi-location inventory and lot/serial number tracking
  • Affordable for SMBs with strong barcode and mobile warehouse support

Cons

  • Dated user interface with a steeper learning curve
  • Lacks native advanced 3PL tools like client portals or automated billing
  • Some features require add-ons or custom configuration

Best For

Small to mid-sized 3PL warehouses or distributors needing cost-effective inventory control integrated with QuickBooks.

Pricing

Perpetual license starts at ~$4,395 plus annual maintenance (~20%); subscription from $169/user/month; implementation fees extra.

Visit Fishbowlfishbowlinventory.com
6
CartonCloud logo

CartonCloud

specialized

All-in-one 3PL software combining warehouse management, transport, and CRM for efficient multi-client logistics operations.

Overall Rating8.1/10
Features
8.7/10
Ease of Use
7.5/10
Value
7.9/10
Standout Feature

Integrated 3PL billing and rate management that automates complex, client-specific invoicing across warehouse and transport services

CartonCloud is a cloud-based warehouse management system (WMS) tailored for 3PL providers, freight forwarders, and transport companies, offering real-time inventory tracking, order fulfillment, picking/packing optimization, and multi-client billing. It integrates seamlessly with transport management systems, EDI standards, and accounting software like Xero and MYOB. The platform emphasizes end-to-end visibility across warehouse, transport, and customer interactions in multi-tenant environments.

Pros

  • Comprehensive 3PL billing engine with complex rate card support
  • Strong integrations for transport, EDI, and e-commerce platforms
  • Real-time dashboards and mobile app for warehouse operations

Cons

  • Steep learning curve for advanced features
  • Pricing is quote-based and lacks transparency
  • Primarily optimized for ANZ market with limited global scalability

Best For

Mid-sized 3PL providers handling integrated warehouse and transport operations for multiple clients.

Pricing

Custom quote-based pricing starting around AUD $200-500/month depending on modules, users, and warehouse size; no public tiers.

Visit CartonCloudcartoncloud.com
7
Made4net logo

Made4net

specialized

Flexible WMS platform tailored for 3PL and 3PL providers with advanced features for order consolidation and client segregation.

Overall Rating7.8/10
Features
8.2/10
Ease of Use
7.4/10
Value
7.6/10
Standout Feature

Advanced multi-client billing and invoicing module that automates per-client chargebacks and profitability reporting

Made4net is a cloud-based Warehouse Management System (WMS) specifically designed for 3PL providers, offering multi-tenant support to manage multiple clients' inventories, orders, and fulfillment processes from a single platform. It provides real-time inventory tracking, automated picking/packing/shipping workflows, and integrations with e-commerce platforms like Shopify and ERPs such as QuickBooks. The software emphasizes scalability for growing 3PL operations with features like lot/serial number tracking and customizable reporting.

Pros

  • Excellent multi-tenant/client management for 3PLs
  • Strong mobile app for warehouse floor operations
  • Robust integrations with e-commerce and accounting systems

Cons

  • Initial setup and configuration can be complex
  • Limited advanced AI-driven optimizations compared to top competitors
  • Customer support response times vary

Best For

Mid-sized 3PL providers managing multiple clients with moderate-to-high order volumes seeking scalable WMS without on-premise hardware.

Pricing

Quote-based pricing starting at around $500/month for small operations, scaling with users, warehouses, and transaction volume; includes implementation fees.

Visit Made4netmade4net.com
8
Manhattan Associates logo

Manhattan Associates

enterprise

Enterprise-grade cloud WMS supporting complex 3PL supply chains with AI-driven optimization and microservices architecture.

Overall Rating8.7/10
Features
9.4/10
Ease of Use
7.6/10
Value
8.1/10
Standout Feature

Multi-tenant 3PL management with client-specific billing, SLAs, and real-time profitability insights

Manhattan Associates provides Manhattan Active WM, a cloud-native warehouse management system (WMS) tailored for 3PL operations, offering end-to-end visibility and control over inventory, order fulfillment, and labor management. It excels in multi-tenant environments, supporting complex client requirements with advanced picking, packing, slotting, and cross-docking capabilities. The platform integrates AI and machine learning for optimized workflows, real-time analytics, and seamless scalability across high-volume distribution centers.

Pros

  • Robust multi-client 3PL support with automated billing and profitability tracking
  • AI-driven optimization for picking, putaway, and labor management
  • Cloud-native microservices architecture for scalability and rapid updates

Cons

  • High implementation costs and lengthy deployment timelines
  • Steep learning curve for non-enterprise users
  • Pricing lacks transparency and favors large-scale operations

Best For

Enterprise-level 3PL providers managing high-volume, multi-client warehouses with complex fulfillment needs.

Pricing

Custom enterprise subscription pricing based on warehouse volume and users; typically starts at $500K+ annually for mid-sized operations.

9
Körber Supply Chain logo

Körber Supply Chain

enterprise

End-to-end supply chain software featuring HighJump WMS for high-performance 3PL warehousing and automation integration.

Overall Rating8.5/10
Features
9.2/10
Ease of Use
7.4/10
Value
8.0/10
Standout Feature

Holistic warehouse orchestration with native AI for predictive labor and slotting optimization

Körber Supply Chain's warehouse management software (WMS) is a robust, enterprise-grade solution tailored for 3PL providers, delivering end-to-end orchestration of warehouse operations including multi-client inventory management, order fulfillment, and labor optimization. It integrates seamlessly with automation technologies like AGVs, sorters, and voice-directed systems to handle high-volume, complex logistics. The platform emphasizes scalability, real-time analytics, and AI-driven insights to enhance efficiency in dynamic 3PL environments.

Pros

  • Advanced multi-tenant support for 3PL billing and client segregation
  • Deep integration with warehouse automation and robotics
  • Comprehensive AI-powered analytics and optimization tools

Cons

  • High implementation costs and long deployment timelines
  • Steep learning curve due to extensive customization needs
  • Less ideal for small-scale 3PL operations without heavy IT support

Best For

Large 3PL providers managing automated, high-volume warehouses across multiple sites with complex client requirements.

Pricing

Custom quote-based pricing; typically starts at $150,000+ annually for mid-sized deployments, plus significant one-time implementation fees.

Visit Körber Supply Chainkoerber-supplychain.com
10
Blue Yonder logo

Blue Yonder

enterprise

AI-powered warehouse management system enabling 3PLs to optimize labor, slotting, and throughput in dynamic multi-client environments.

Overall Rating8.4/10
Features
9.1/10
Ease of Use
7.6/10
Value
7.9/10
Standout Feature

AI-powered Digital Twin technology for simulating and optimizing warehouse operations in real-time

Blue Yonder provides an enterprise-grade Warehouse Management System (WMS) tailored for 3PL operations, managing multi-client inventories, order fulfillment, and logistics with high precision. It integrates AI and machine learning for demand forecasting, dynamic slotting, labor optimization, and real-time visibility across the supply chain. The platform excels in handling complex, high-volume environments with automation features like voice-directed picking and robotics integration.

Pros

  • Advanced AI-driven optimization for slotting, labor, and inventory
  • Robust multi-tenant support ideal for 3PL multi-client operations
  • Seamless integration with broader supply chain planning tools

Cons

  • High implementation costs and long deployment timelines
  • Steep learning curve for non-technical users
  • Custom pricing lacks transparency for smaller operations

Best For

Large enterprise 3PL providers managing complex, high-volume warehouses for multiple clients requiring AI-enhanced automation.

Pricing

Custom quote-based enterprise pricing, typically $500K+ annually for mid-to-large implementations including modules and support.

Visit Blue Yonderblueyonder.com

Conclusion

The top 3PL warehouse software options demonstrate exceptional tailored solutions, with Extensiv leading as the top choice for its seamless multi-client inventory and billing management. Logiwa impresses with real-time visibility and automated picking, while Deposco excels in high-volume e-commerce fulfillment and client-specific workflows, each serving distinct operational needs. Collectively, these tools elevate 3PL efficiency.

Extensiv logo
Our Top Pick
Extensiv

Begin your search with Extensiv to optimize multi-client operations and drive success in your 3PL fulfillment center.